FastQCFastQC Report
Thu 5 Jan 2023
EGAF00000652376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000652376
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences62103133
Sequences flagged as poor quality0
Sequence length111
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGGAACTCCTTTTCTTTGCTAAAAGGTATAAAGCTGCTTTTACAGAATG649740.10462274101372632No Hit
CGGAACTCCTTTTCTTTGCTAAAAGGTATAAAGCTGCTTTTACAGAATGT634460.10216231764023885No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)