FastQCFastQC Report
Wed 1 May 2024
EGAF00000656410

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656410
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18921650
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length93
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT324410.17144910723959061No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT225000.11891140571778887No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)