FastQCFastQC Report
Sat 1 Apr 2023
EGAF00000656458

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656458
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14441815
Sequences flagged as poor quality0
Sequence length93
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT402530.278725354119271No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT278910.1931266949479688No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT199200.13793280138265168No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)