FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000656551

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656551
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7480283
Sequences flagged as poor quality0
Sequence length93
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT166140.22210389633654232No Hit
CTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGT143110.19131629110823747No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT130740.1747794836104463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)