FastQCFastQC Report
Mon 5 Sep 2022
EGAF00000656562

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656562
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9559383
Sequences flagged as poor quality0
Sequence length93
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT279990.2928954724379178No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT232270.24297593265172032No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT112550.11773772428618039No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)