FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000656565

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656565
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7334313
Sequences flagged as poor quality0
Sequence length93
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT176530.2406905732002438No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT151770.20693144674900021No Hit
CTTATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGT143680.19590110212094847No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT74380.10141372477558566No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)