FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000656568

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656568
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5113026
Sequences flagged as poor quality0
Sequence length93
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT143540.2807339528490565No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT100440.1964394470123954No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT56770.11103014144657194No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)