FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000656575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656575
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5647433
Sequences flagged as poor quality0
Sequence length93
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT117950.20885595278421187No Hit
CTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGT116680.2066071434579215No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT95390.16890859971247113No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)