FastQCFastQC Report
Thu 9 Feb 2023
EGAF00000656816

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656816
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93343293
Sequences flagged as poor quality0
Sequence length93
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2055060.2201615064083929No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1834880.19657330923604763No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1151190.1233286252285957No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)