FastQCFastQC Report
Sat 1 Apr 2023
EGAF00000656827

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656827
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13570491
Sequences flagged as poor quality0
Sequence length93
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT341790.25186266289112164No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT240790.17743646858466652No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT163500.120482007614905No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)