FastQCFastQC Report
Wed 1 May 2024
EGAF00000656871

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656871
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19330218
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length93
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT507580.26258369150311706No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT360910.18670767189485393No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT199410.10315972639315293No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)