FastQCFastQC Report
Tue 27 Sep 2022
EGAF00000656910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20276242
Sequences flagged as poor quality0
Sequence length93
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT786730.38800582474799816No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT677410.3340905084877168No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT416830.2055755696741043No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)