FastQCFastQC Report
Sun 2 Apr 2023
EGAF00000656956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20361777
Sequences flagged as poor quality0
Sequence length93
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT470970.2313010303570263No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT346680.170260188980559No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT224660.11033418154024573No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)