FastQCFastQC Report
Wed 1 May 2024
EGAF00000656961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20859229
Total Bases1.9 Gbp
Sequences flagged as poor quality0
Sequence length93
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT459270.22017592308900777No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT368160.17649741512497896No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT237410.11381532845725027No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)