FastQCFastQC Report
Sat 13 May 2023
EGAF00000656974

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656974
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23891193
Sequences flagged as poor quality0
Sequence length93
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT553070.23149534642326147No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT395730.16563844258426105No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT259470.10860487377084937No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)