FastQCFastQC Report
Mon 5 Sep 2022
EGAF00000656991

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000656991
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4255847
Sequences flagged as poor quality0
Sequence length93
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT100410.2359342335380008No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGT82080.1928640761756708No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT72000.1691790141891849No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)