FastQCFastQC Report
Thu 5 Jan 2023
EGAF00000692307

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000692307
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77859943
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGAAATATTAGTTGGCGGATGAAGCAGATAGTGAGGAAAGTTGAGCCAA1135340.14581824186539669No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG1080370.1387581288108572No Hit
GGCGGATGAAGCAGATAGTGAGGAAAGTTGAGCCAATAATGACGTGAAGT840240.10791685270049581No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)