FastQCFastQC Report
Fri 10 Feb 2023
EGAF00000694368

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000694368
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112904908
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG1273280.11277454829510157No Hit
CACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAACGGAGCA1212400.10738240006360042No Hit
GGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAAC1139360.10091323930754188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)