FastQCFastQC Report
Fri 23 Dec 2022
EGAF00000694463

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000694463
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences236171927
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT32590791.3799603709885468No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA13874940.587493195158627No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)