FastQCFastQC Report
Fri 30 Dec 2022
EGAF00000694491

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000694491
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences221002402
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT29509231.3352447635388143No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10927340.49444439974910315No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA2266650.10256223369011165No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)