FastQCFastQC Report
Mon 26 Dec 2022
EGAF00000694501

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000694501
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences239177211
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT61756472.5820382193519267No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30245131.2645489874869391No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)