FastQCFastQC Report
Mon 12 Sep 2022
EGAF00000709916

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000709916
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5241677
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCTCTGGCTA174716333.332137787200544No Hit
GACTGTATTACCAAGCTTCCCTCTGGTTTGTAGCTCAACATTAATGAGTT751101.43293835160007No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCAGTGATTA562971.0740264995344049No Hit
GACTGTATTACCAAGCTTCAGAAATAAAACAGTTGAGTGATCTCTGGCTA488030.9310569880593558No Hit
GACTGTATTACCAAGCTTCTTTCTCAAAACAGGGCTCAGGCCTAGAAAAA476010.9081253957464376No Hit
GACTGTATTACCAAGCTTTCCCACCTACCTACCCAGAGCAGAAGGAAGGT201300.3840373987180057No Hit
GACTGTATTACCAAGCTTCTCTCTGCCTTCTGGGCTTCAAGGCCAGGCCT173960.33187851903121846No Hit
GACTGTATTACCAAGCTTAATCCATGTAAAGCTATTATTATTGTGCTGCT173010.33006612196821744No Hit
GACTGTATTACCAAGCTTCTTGTAGAAAAGATCTCTGGCTATCCTTGCCA172030.3281964913137532No Hit
GACTGTATTACCAAGCTTGAATATTGAACTTAGGTGGGAGGTATTATTCC162000.30906139390122667No Hit
GACTGTATTACCAAGCTTTTGGGGCAAAGGCAATATAAATTATGCCCTTG154110.29400895934640764No Hit
GACTGTATTACCAAGCTTAGGGTAATGTATGGGGTCACCAAGGAGATGAG146010.2785558896513463No Hit
GACTGTATTACCAAGCTTTGTGCTGTGTTAAAACCAGGAAGGTATCTACG136830.26104241066361017No Hit
GACTGTATTACCAAGCTTGGGCAGAGGCAACAGGAAGTGGGAAATGAGTC134590.25676896916769193No Hit
GACTGTATTACCAAGCTTCCTACTGCTCTGAGGTCTTAAGGGATGTTCTG127110.24249872702953654No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCTCGGCTCA120530.2299454926352768No Hit
GACTGTATTACCAAGCTTCATGAGGGTAAGGCCTGTTAGTTTATTTTTTT117160.22351625252757848No Hit
GACTGTATTACCAAGCTTCCTTATCTCCCATCTAAAGCTATCTGTGAACA110320.21046699367397115No Hit
GACTGTATTACCAAGCTTATGGGGAGTTTGAAGTGGTATGTCTAACAGAA110160.21016174785283412No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCTTGGCTCA109080.20810133856015928No Hit
GACTGTATTACCAAGCTTTCAGTCCCATGTTAGACAGTGTGATTAGAGGA108690.2073573018711378No Hit
GACTGTATTACCAAGCTTTTCATATTCTCAAATATTCACTGTTTAATCAA102000.1945942109748464No Hit
GACTGTATTACCAAGCTTACCTGGGACAGTCCTAGTGAAGCCACCACTTT98720.18833667164153764No Hit
GACTGTATTACCAAGCTTCATGCAAATGTGAACTTGAACTCTGCTCTTAG96730.184540176741146No Hit
GACTGTATTACCAAGCTTGTTACAAGTGCAGAACCCAACCCTATACAGTC96370.18385337364358773No Hit
GACTGTATTACCAAGCTTTCTCACCATTAATCCTGTGGTCTGAGGGCCTT95660.1824988453122922No Hit
GACTGTATTACCAAGCTTCTGCAGAGTTCTTTTGGGACACTCTCTCTGGG89660.1710521270196542No Hit
GACTGTATTACCAAGCTTAACATCACGCTCTCTCGGTAGAAAGGAGACAT88650.1691252627737268No Hit
GACTGTATTACCAAGCTTACAATGAAGTTTTGTGTTGAGTTATAACATTC87750.1674082550298311No Hit
GACTGTATTACCAAGCTTAAGAAGTAAAACAGTTGAGTGATCTCTGGCTA85290.16271510052984953No Hit
GACTGTATTACCAAGCTTTCCTCTAACTTACTTTCCCAAGGCAGAGAGAA85090.16233354325342825No Hit
GACTGTATTACCAAGCTTAAGGAATAAAACAGTTGAGTGATCTCTGGCTA80070.15275645561525442No Hit
GACTGTATTACCAAGCTTAATATAAGAGAATCTAGATTTACAGAAGAAGA77240.1473574201538935No Hit
GACTGTATTACCAAGCTTTTAAACTTTTTGGACTTTAACCTACAATAAGA75860.14472467494658675No Hit
GACTGTATTACCAAGCTTTTTCTATGGTCCGGTGCTGTGCAGATTATCTC75430.14390432680228102No Hit
GACTGTATTACCAAGCTTAAGAAATAAAGCAGTTGAGTGATCTCTGGCTA74930.14295043361122783No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCTCTCATTT74780.1426642656539119No Hit
GACTGTATTACCAAGCTTACATTCTAGCAGAGAAAAATGAATCAATTATA74580.14228270837749066No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGGGTGATCTCTGGCTA72870.1390203936640888No Hit
GACTGTATTACCAAGCTTGGGTGTTGGATAACCCATTCAAGACACAGGTG71800.13697906223523504No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGGTCTCTGGCTA71290.13600609118036078No Hit
GACTGTATTACCAAGCTTTATCATACTAGTAACTGCAGTTATTAAAATTA71280.13598701331653973No Hit
GACTGTATTACCAAGCTTAAGAGATAAAACAGTTGAGTGATCTCTGGCTA68880.13140832599948452No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCACCTGAGG68040.12980578543851518No Hit
GACTGTATTACCAAGCTTAAGAAATAAGACAGTTGAGTGATCTCTGGCTA67730.12921437166006222No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCACGAGGTC67570.12890912583892522No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGACCTCTGGCTA67510.12879465865599884No Hit
GACTGTATTACCAAGCTTTTATGGGTAACACACACCTATATTGTTGTTAG66230.12635269208690272No Hit
GACTGTATTACCAAGCTTTGGCAAGATTTGGTATCTGTAGCAGACTCCAG66080.12606652412958677No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCTCAGCTCA64640.12331931173935366No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCCCTGGCTA62560.11935111606457245No Hit
GACTGTATTACCAAGCTTAAGAAATAGAACAGTTGAGTGATCTCTGGCTA60450.11532568679832811No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGCTGAGTGATCTCTGGCTA59660.11381853555646408No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGCGATCTCTGGCTA59400.11332251109711644No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCACTTGAGG58870.11231138431460007No Hit
GACTGTATTACCAAGCTTCATTCATTTCATGGGGAGAAATGACATATCTC58830.11223507285931583No Hit
GACTGTATTACCAAGCTTTTTCAGGGTTGCATCATTTGGCCCTATTCACC58620.11183443771907349No Hit
GACTGTATTACCAAGCTTTCAGATGATACCGTTGCTGCTGGCCCATGGAT58480.11156734762557861No Hit
GACTGTATTACCAAGCTTAGGAAATAAAACAGTTGAGTGATCTCTGGCTA58150.11093777811948351No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACGGTTGAGTGATCTCTGGCTA57700.11007927424753565No Hit
GACTGTATTACCAAGCTTGACCGTGGCTCCTCATTCTGTGGAGTGACGAT55580.10603476711747023No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCTCCGGCTA55360.10561505411340684No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTCGAGTGATCTCTGGCTA54360.1037072677313005No Hit
GACTGTATTACCAAGCTTCCTGCAAAACGGGAGGAGCGTATTGATCTCTG52440.10004431787765634No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)