FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000709923

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000709923
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7088703
Sequences flagged as poor quality0
Sequence length101
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAACAGCCACACCAGCAAGCTTATCTCAGATGATTAAATGGCAGCAGATA94360613.311405485601528No Hit
GAACAGCCACACCAGCAAGCTTGATACGGCGCCCAGCAAAATGTCGTATG2825843.986399204480707No Hit
GAACAGCCACACCAGCAAGCTTAATGATACGGCGCCCAGCAAAATGTCGT2428483.425845320363965No Hit
GAACAGCCACACCAGCAAGCTTATGATACGGCGCCCAGCAAAATGTCGTA1900282.680716063291127No Hit
GAACAGCCACACCAGCAAGCTTGAGACGGCGCCCAGCAAAATGTCGTATG1552132.1895824948513147No Hit
GAACAGCCACACCAGCAAGCTTATGAGACGGCGCCCAGCAAAATGTCGTA1155071.629451819324353No Hit
GAACAGCCACACCAGCAAGCTTAATGAGACGGCGCCCAGCAAAATGTCGT1005151.417960380058242No Hit
GAACAGCCACACCAGCAAGCTTGCTTTGAACTCCAAGTACCTCCAAGGTC784151.1061967189202313No Hit
GAACAGCCACACCAGCAAGCTTATACGGCGCCCAGCAAAATGTCGTATGC752161.0610685762966794No Hit
GAACAGCCACACCAGCAAGCTTAGCTCAGTTAACTCAGCACACAGTTCGT602560.8500285595263337No Hit
GAACAGCCACACCAGCAAGCTTTGTCATTTTGCTCTTAACAATAAACCTT590840.8334952106189243No Hit
GAACAGCCACACCAGCAAGCTTCCATGTGATCTGCCTGCCTCAGCCTCCC577180.8142251128309368No Hit
GAACAGCCACACCAGCAAGCTTAGACGGCGCCCAGCAAAATGTCGTATGC512110.722431169707632No Hit
GAACAGCCACACCAGCAAGCTTCTCCCTGGGCAGGCTGTGTTGCTAACAC508210.7169294580404906No Hit
GAACAGCCACACCAGCAAGCTTCGCTTCTGTGAGCCCCCTTGTCTGTTGG497830.702286440834099No Hit
GAACAGCCACACCAGCAAGCTTCATGTGATCTGCCTGCCTCAGCCTCCCA463950.6544920840949325No Hit
GAACAGCCACACCAGCAAGCTTACGGCGCCCAGCAAAATGTCGTATGCCG361220.5095713560012318No Hit
GAACAGCCACACCAGCAAGCTTACTGAATCAAGATCTTGCTTGGTGGGGT348620.4917965952304674No Hit
GAACAGCCACACCAGCAAGCTTGTCCGCATGTGATCTGCCTGCCTCAGCC313900.4428172544399166No Hit
GAACAGCCACACCAGCAAGCTTATGCTTAAAACTATTTAAATTCAAAAGT298000.42038719918157097No Hit
GAACAGCCACACCAGCAAGCTTTGCCTGGCTGACAAAGGGAGGAGGGGCA296290.41797491021982436No Hit
GAACAGCCACACCAGCAAGCTTTAGAGCTGAGCCTTGGAGGAGGGGTGTC295510.41687456788639615No Hit
GAACAGCCACACCAGCAAGCTTCAACTACATCCTAATTACCCAGTGGGAA282760.39888820282074167No Hit
GAACAGCCACACCAGCAAGCTTCGCTTCTATAATGATGATGAGCTAGTCT242180.3416421875764861No Hit
GAACAGCCACACCAGCAAGCTTATCATAGCATCTTAAAGTTGGAAGGGAC238640.3366483262170809No Hit
GAACAGCCACACCAGCAAGCTTCCCAGAATGGTTGCTGTCTCTGAAGGAT238170.33598529942642535No Hit
GAACAGCCACACCAGCAAGCTTATGAAGTGTTACAAGATAAGGGCAACAG230540.32522169429301806No Hit
GAACAGCCACACCAGCAAGCTTTTCTTTAGTAAGACTAATGCTATCAAGG229770.32413545891258244No Hit
GAACAGCCACACCAGCAAGCTTTGATACGGCGCCCAGCAAAATGTCGTAT218270.30791246297101177No Hit
GAACAGCCACACCAGCAAGCTTGTCTTTTATTTTGTTACACATGTGATCT213880.30171951060722957No Hit
GAACAGCCACACCAGCAAGCTTATGACATAAAGGCTTTATTTATTTATTT212480.2997445371882557No Hit
GAACAGCCACACCAGCAAGCTTCTTGGCCCCAGGACTGCCCCAGGGGTGG210870.2974733177564358No Hit
GAACAGCCACACCAGCAAGCTTCACATGTGATCTGCCTGCCTCAGCCTCC206030.29064555250798346No Hit
GAACAGCCACACCAGCAAGCTTTATCCTACTGTAATAGGCTGCTCCAAAG204920.2890796807257971No Hit
GAACAGCCACACCAGCAAGCTTGATTCAAAAATCCAACCACATGTGATCT200440.28275976578508083No Hit
GAACAGCCACACCAGCAAGCTTGGTTTCCTCACCTTGAAAGTGGGAATTA198810.2804603324472756No Hit
GAACAGCCACACCAGCAAGCTTGGCCAGCCTTGGCTGTTTTCTGATCCCG198460.27996658909253214No Hit
GAACAGCCACACCAGCAAGCTTATCCACCATGTGATCTGCCTGCCTCAGC191420.2700352941856924No Hit
GAACAGCCACACCAGCAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCT186520.263122887219284No Hit
GAACAGCCACACCAGCAAGCTTTGTGCTTGGGTTTGGGCACTGCAGCTGT183820.259314009911263No Hit
GAACAGCCACACCAGCAAGCTTTACGGCGCCCAGCAAAATGTCGTATGCC183100.2582983092957908No Hit
GAACAGCCACACCAGCAAGCTTGGTGTACATTGACATTTGAATTCGATGT182650.25766349641112063No Hit
GAACAGCCACACCAGCAAGCTTGGCACTATTCCAGACCCCGTGGGGCACT172490.24333083217056772No Hit
GAACAGCCACACCAGCAAGCTTCCAGGGCCCGACTGCCCAGCACAGCCCA167340.2360657513793426No Hit
GAACAGCCACACCAGCAAGCTTCAAGATGGTATCTTTAGGATAATTACAT156780.2211688090190829No Hit
GAACAGCCACACCAGCAAGCTTCCCAGTCCCTGGATTGGATTCCCACATT154560.2180370654547101No Hit
GAACAGCCACACCAGCAAGCTTTGGGTATATGACAGGAGGCAGCATTTGA152170.21466550368946197No Hit
GAACAGCCACACCAGCAAGCTTCTGGAGTGTTTGCCCAGTCTCCGGGGAC151760.21408711861676247No Hit
GAACAGCCACACCAGCAAGCTTTTACCTGGTGAATTTAAGAAGACATAAT151400.21357926830902638No Hit
GAACAGCCACACCAGCAAGCTTCGTGTCCATTTACAGTCACTTTCCATTG150490.21229553558669337No Hit
GAACAGCCACACCAGCAAGCTTTTCATGTGATCTGCCTGCCTCAGCCTCC149840.2113785836421698No Hit
GAACAGCCACACCAGCAAGCTTCCAACCCCCTCCCCTCAGTCTCACACCC144660.20407118199196667No Hit
GAACAGCCACACCAGCAAGCTTTTCCATTTTTTCTTGCACAAAGCAGCTG137660.19419631489709754No Hit
GAACAGCCACACCAGCAAGCTTTGAGACGGCGCCCAGCAAAATGTCGTAT135000.19044386540104727No Hit
GAACAGCCACACCAGCAAGCTTTGTTCTCTTCATCTGGCCTCAGAGTTAG132980.1875942608965279No Hit
GAACAGCCACACCAGCAAGCTTGCATTCTAGTCCGAGGAGCAGACAGAAT132280.186606774187041No Hit
GAACAGCCACACCAGCAAGCTTGATCAGGAGAATATTGAAGGGAGACTCG129190.1822477257123059No Hit
GAACAGCCACACCAGCAAGCTTGGGGCTTATCCCATTTTTGGCTTGGTGA124000.17492621710911008No Hit
GAACAGCCACACCAGCAAGCTTGTGCAATACATGTGATCTGCCTGCCTCA123980.17489800320312474No Hit
GAACAGCCACACCAGCAAGCTTCAGGAAAGAATAGGCTGCACAGGGGCGC123430.1741221207885279No Hit
GAACAGCCACACCAGCAAGCTTGACCACTTCTAGCCAGGGCCTCGGTGGC123240.17385408868166716No Hit
GAACAGCCACACCAGCAAGCTTTAACCGCTGTCCCTCATGTGATCTGCCT122920.17340266618590172No Hit
GAACAGCCACACCAGCAAGCTTTCATGTGATCTGCCTGCCTCAGCCTCCC122340.17258446291232685No Hit
GAACAGCCACACCAGCAAGCTTCCTGAGAGCAGAAACTTTTGCTACTTTT119980.16925522200605667No Hit
GAACAGCCACACCAGCAAGCTTCTGCCCTATTTCTGGCCCCACGTCCCAA119860.16908593857014464No Hit
GAACAGCCACACCAGCAAGCTTAGGAGAGGCTTTCTCTGTGAGGGAGGAG118240.16680061218533207No Hit
GAACAGCCACACCAGCAAGCTTAAGCAATGTGGCCTCCCAAAATGCTGGG118050.16653258007847133No Hit
GAACAGCCACACCAGCAAGCTTATAACAAAAGATATAACAGAGAGTTTAT114240.161157830988264No Hit
GAACAGCCACACCAGCAAGCTTGAAAATACCTGTAGGGAGTAGGAAACTA111040.15664360603060953No Hit
GAACAGCCACACCAGCAAGCTTTACCCTGGATGGAGAGTGTATCTCATTT111020.15661539212462422No Hit
GAACAGCCACACCAGCAAGCTTCTTGACATGTGATCTGCCTGCCTCAGCC106910.15081743444463677No Hit
GAACAGCCACACCAGCAAGCTTAGGACTCTGATCCTTAGTGCCTGTAATA103250.14565428964931948No Hit
GAACAGCCACACCAGCAAGCTTAATTAATGCTTACAAAGTGCTCTGAGGC103160.14552732707238544No Hit
GAACAGCCACACCAGCAAGCTTCATAAGTGAAGGAGAAATAAAATACTTT102490.14458216122187656No Hit
GAACAGCCACACCAGCAAGCTTCAGTCTCCCAAAGTGCTGGGATTACAGG101070.14257897389691737No Hit
GAACAGCCACACCAGCAAGCTTCAGGAGGGAATGGAACAGTGAACTGGTT101020.14250843913195405No Hit
GAACAGCCACACCAGCAAGCTTCCTCTCAATGGCAGGGGATACTCAGGGT98090.13837510190510166No Hit
GAACAGCCACACCAGCAAGCTTGTACCCACGCTGTGCCACTCAGAAGGAA97960.13819171151619697No Hit
GAACAGCCACACCAGCAAGCTTGAGAAGGGAGGCTGGTCTTGGGAGAGGC95610.1348765775629195No Hit
GAACAGCCACACCAGCAAGCTTTCAAAAGGAGTACAAGTTTCATAGAGCA94510.13332481273372576No Hit
GAACAGCCACACCAGCAAGCTTCTAGAAAATTCCAACTAAGAAACTGGAG91230.12869773215212996No Hit
GAACAGCCACACCAGCAAGCTTCCTTCCTTAGCTTTAGTATGTCCTATTC90900.12823220270337185No Hit
GAACAGCCACACCAGCAAGCTTGGAGGCTGAAGCAGCTCCACTGTGAATG90630.12785131497256974No Hit
GAACAGCCACACCAGCAAGCTTGGAGACCAGTCCTAGACCTACACGCTAC90420.12755506895972366No Hit
GAACAGCCACACCAGCAAGCTTCACCACACCCTTGATGGTGGGAGCTCGT89800.1266804378741781No Hit
GAACAGCCACACCAGCAAGCTTCTGGAGGCCCTCAGCAGAAGCGAATGCC89710.12655347529724406No Hit
GAACAGCCACACCAGCAAGCTTAAACAAGCCCTGAAAGGATCAATCTGAA89640.1264547266262954No Hit
GAACAGCCACACCAGCAAGCTTGGGCCAGACCCACACAGCCCCAGGGAGC88660.12507224523301372No Hit
GAACAGCCACACCAGCAAGCTTCTGTGGGTCTCCCCACAGTGGCCTGGAG87980.12411297242951214No Hit
GAACAGCCACACCAGCAAGCTTTGAATCCTGAACTCCCAGCCCCAGCATT86860.1225329936943331No Hit
GAACAGCCACACCAGCAAGCTTCTACCTAAGGTCAACATTATTCTCCCAT85010.1199232073906891No Hit
GAACAGCCACACCAGCAAGCTTCTACTTACAATTGAAAATTGACATGTGA82910.11696074726222835No Hit
GAACAGCCACACCAGCAAGCTTCAGTGGCCTGCTCCATCCCCTAATGACT82730.11670682210836031No Hit
GAACAGCCACACCAGCAAGCTTTCCCCCGAATACTCTTGGGAGATGCAGG82240.11601558141171946No Hit
GAACAGCCACACCAGCAAGCTTGGGATGCACTGTCTTGAAGAATGAAAAG80390.1134057951080755No Hit
GAACAGCCACACCAGCAAGCTTGCTAGGCAAGGGCAATGGGCCTCCCAGC80370.11337758120209013No Hit
GAACAGCCACACCAGCAAGCTTACAAGTTCGAGACCAGCCTGGGTAACAT79960.11279919612939067No Hit
GAACAGCCACACCAGCAAGCTTTAAAAAGCAGCGTGCAACGCAATTTCCC79020.11147314254807968No Hit
GAACAGCCACACCAGCAAGCTTTGTTTATTATTCAAGAGACTGTTCAAAT78810.1111768965352336No Hit
GAACAGCCACACCAGCAAGCTTCCAATCATGTGATCTGCCTGCCTCAGCC75080.10591500306896763No Hit
GAACAGCCACACCAGCAAGCTTGAATTGGAAACTTCATTTATACCTTGAT74690.10536483190225349No Hit
GAACAGCCACACCAGCAAGCTTTTTGGGGGGATGATGGAAATTTATTTAA74570.10519554846634145No Hit
GAACAGCCACACCAGCAAGCTTCAGGGTGGATTATTACCTGACACAAAAA72340.102049697948976No Hit
GAACAGCCACACCAGCAAGCTTGACGGCGCCCAGCAAAATGTCGTATGCC71230.1004838261667896No Hit
GAACAGCCACACCAGCAAGCTTCCCTTCACAGCCCTGCTGCAACCTCTCA71020.10018758015394352No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)