FastQCFastQC Report
Mon 12 Sep 2022
EGAF00000709924

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000709924
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3512515
Sequences flagged as poor quality0
Sequence length101
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAATTAC69394419.75632844272551No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTA561641.5989682606337623No Hit
ACATTTGGCCACAAGCTTTCTGGAAAATTGATGAATATTTGAAAATTAAT160350.4565105060049566No Hit
ACATTTGGCCACAAGCTTATAGGTTGGAAGTGAGTGGTTTGACATAGTTA149290.4250230959867787No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTCAGTTTGCCAGTA140140.3989733851670384No Hit
ACATTTGGCCACAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAG109470.3116570320696139No Hit
ACATTTGGCCACAAGCTTCTAGAAATAATAAGTGAGTTTAGCAAGTTAAC100260.2854365034740065No Hit
ACATTTGGCCACAAGCTTACAAATTTCTAGGCAAAAAGCACACTTCAGGA91390.2601839422749796No Hit
ACATTTGGCCACAAGCTTACCTATTTTTAGGATCACTGGACACCTGGCCA83530.23780681363638306No Hit
ACATTTGGCCACAAGCTTATAAACTGTATACCCTAAAGAGTGAATTTTAC75150.21394926427360453No Hit
ACATTTGGCCACAAGCTTACTCTCAATATAAAAGATTCTGGTGCTCTAAG71480.20350091031639722No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTTGGTTTGCCAGTA57720.16432670038419767No Hit
ACATTTGGCCACAAGCTTTCCTTGCTCCAGAGTGAGACACTATCTCCATC54220.15436233012528058No Hit
ACATTTGGCCACAAGCTTAATGATAATCTAAAGGATGATCTGGTCCTTAC51800.14747267983197224No Hit
ACATTTGGCCACAAGCTTCAATGCCTGAAACAAACAATATACTTTGGTAG43850.12483932452957497No Hit
ACATTTGGCCACAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTACAG42040.11968632162424929No Hit
ACATTTGGCCACAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAA38920.11080379727915753No Hit
ACATTTGGCCACAAGCTTACAAGCAGAGAAGGAGCAGAGTGTCCGCAATC38480.10955113358946511No Hit
ACATTTGGCCACAAGCTTTCACCTCTTGTTAAAGCAGTAAATGGTCTTTG36940.1051668106755416No Hit
ACATTTGGCCACAAGCTTAACATGTCCACAAACAATCTCTTTTTTCTAGC36770.10468282697725134No Hit
ACATTTGGCCACAAGCTTTTCACATTTTTTATATCAAGAAATAAAGCAAG36610.10422731290827228No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)