FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000709927

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000709927
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10853361
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCATATGCC504746746.506027027019556No Hit
CCAGGCTAAGTCACAAGCTTGATCTCCTTTGAAAAGAGCTCAGCTTAAAG857350.7899396325248924No Hit
CCAGGCTAAGTCACAAGCTTAAGGGGCATAGCTGGACCCCTGCATATATG477260.43973475129040673No Hit
CCAGGCTAAGTCACAAGCTTTATTGAAGTATAATTGATATACAAAGACCT411990.37959669820251996No Hit
CCAGGCTAAGTCACAAGCTTCACAGAGGACACACCAAGGAGGCTGAATCT390490.3597871663902085No Hit
CCAGGCTAAGTCACAAGCTTGTGAGATTCACCTTTCCTCGCTTTATATCT335260.3088997039718848No Hit
CCAGGCTAAGTCACAAGCTTGGTATGGAGGAGGAACAGAAAAAATGCCAG314950.29018660671104557No Hit
CCAGGCTAAGTCACAAGCTTCTGATTTGTACGTCAGGGGTGAAGTGCAGG296980.27362952361024384No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGCCTCATCACACCATATGCC262330.2417039293173792No Hit
CCAGGCTAAGTCACAAGCTTCAGAGAACCCATCTTGAAAATGGTAACACT255270.23519903189435973No Hit
CCAGGCTAAGTCACAAGCTTGCCAGTAGAAATAGTGACTCTCACATACTG253750.23379854406390793No Hit
CCAGGCTAAGTCACAAGCTTCTGTTATAAGGTCTCATCACACCATATGCC232540.21425621058766955No Hit
CCAGGCTAAGTCACAAGCTTGAAACCATCATTCTCAGCAAACTAACACAG229320.21128938768368621No Hit
CCAGGCTAAGTCACAAGCTTTGCTGATCCTGACATACTGACATATATGTT220660.20331029254440167No Hit
CCAGGCTAAGTCACAAGCTTATCAAGAACAAACTAAAAGAAGATTGTAAG218910.2016978887922368No Hit
CCAGGCTAAGTCACAAGCTTTTATTTATTTATTCTTTTTTTTTAAAGCCG217390.20029740096178503No Hit
CCAGGCTAAGTCACAAGCTTCCCTAAACAGGGCTTGAGCTCTGGAAGGAG207080.19079803942760218No Hit
CCAGGCTAAGTCACAAGCTTCACAGAGGACACACCGAGGAGGCTGAATCT200700.18491967603399537No Hit
CCAGGCTAAGTCACAAGCTTACTTTAACCCTTAAAGAATGAGCTTTAAAA198320.18272680693105112No Hit
CCAGGCTAAGTCACAAGCTTTGGAAAAGTGTTTAGGGCCAATCAGTAGAA197550.18201734928009858No Hit
CCAGGCTAAGTCACAAGCTTGCATAATTCTAGCCCCAGTGATTCTTCTTT185010.17046332467887138No Hit
CCAGGCTAAGTCACAAGCTTGGCTCTGTCATTTACTGGCCTCAAAATGTC181330.1670726699314618No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCACCACACCATATGCC179420.16531284640767038No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCCCATCACACCATATGCC178300.16428090800628486No Hit
CCAGGCTAAGTCACAAGCTTGGACAAGAGCCCCCAACTCTGATCTCAATT177510.16355302288387902No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACGCCATATGCC176060.16221703120351383No Hit
CCAGGCTAAGTCACAAGCTTTGTTCCAATTATCTACTGCTACATAACAGC175510.16171027573854774No Hit
CCAGGCTAAGTCACAAGCTTATTGTACTTAAATCCACAAAAATTAGGTAC175270.16148914608110795No Hit
CCAGGCTAAGTCACAAGCTTTCATTTTAATAAAAGTGTCTCCTATTTTTT171790.15828276604823152No Hit
CCAGGCTAAGTCACAAGCTTCTTTTCCTGCTCTTATTGCATGCTCAGGTA169490.15616360683110053No Hit
CCAGGCTAAGTCACAAGCTTTGGATTTGAGTTTGTGTTTCCAAACACACT168420.15517773710834828No Hit
CCAGGCTAAGTCACAAGCTTTCGTTATAAGGTCTCATCACACCATATGCC165080.152100349375645No Hit
CCAGGCTAAGTCACAAGCTTCATCTAATGCATTGGCTTTTTGGCATCTCC162910.15010096872296055No Hit
CCAGGCTAAGTCACAAGCTTATTGGAAAGCATTTAAGAACGTTAGAGCGT161220.14854384738515564No Hit
CCAGGCTAAGTCACAAGCTTCATTCATTCACAAGTCCTCTCTGGATCCAT161010.14835035893489582No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAGGGTCTCATCACACCATATGCC155930.14366978118575435No Hit
CCAGGCTAAGTCACAAGCTTTTGCTATAAGGTCTCATCACACCATATGCC153420.14135713351836357No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCATACGCC152760.14074902696040423No Hit
CCAGGCTAAGTCACAAGCTTTTATACCTTCTAGACCAGGAGATTATGGAC152410.14042654620997128No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCGCACCATATGCC150300.13848244797164674No Hit
CCAGGCTAAGTCACAAGCTTGAAAAATTTCATCTGAAAATGAATGTTTTG143090.13183934451272744No Hit
CCAGGCTAAGTCACAAGCTTTTCTGAGAGACAAGATGGTTATTTGTACCA141680.1305402077752689No Hit
CCAGGCTAAGTCACAAGCTTCCTTTCTCGATGTGAAAAGAACAAACCTAT141330.1302177270248359No Hit
CCAGGCTAAGTCACAAGCTTGCTTTTGTATATGTAAGGAACCACACAGAG141020.12993210121730955No Hit
CCAGGCTAAGTCACAAGCTTCAGAGAGAAGATGACATCAAAATAAGGGCC138350.12747203377829228No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCGTCACACCATATGCC137770.1269376371061462No Hit
CCAGGCTAAGTCACAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTAC136780.1260254772692072No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCGTATGCC135810.12513174490372153No Hit
CCAGGCTAAGTCACAAGCTTCCCTCCACTTTACTCATCAGCAATGCAGCT135460.12480926415328855No Hit
CCAGGCTAAGTCACAAGCTTCTGCTAGAAGCCAGTATCACAAATCTAGAA132800.12235841044999794No Hit
CCAGGCTAAGTCACAAGCTTCTTTTAAATATAGTAAGGAAGAGTTTCTCT129150.11899539690976833No Hit
CCAGGCTAAGTCACAAGCTTTGCCTAAGACAGACACACGCATGCTCAGGT128300.11821222937300252No Hit
CCAGGCTAAGTCACAAGCTTTCTTGTCAACAAATAAAATGAATACTATTC126460.11651690199929773No Hit
CCAGGCTAAGTCACAAGCTTAGGGATGGTCTTCTCTAGAGCTTCCAAACT123800.11406604829600711No Hit
CCAGGCTAAGTCACAAGCTTTTGTTGTAAGGTCTCATCACACCATATGCC122420.1127945527657285No Hit
CCAGGCTAAGTCACAAGCTTTTTCCTCTAGGTACAGTGTTAGACAGTACA121220.11168890447852975No Hit
CCAGGCTAAGTCACAAGCTTCAATTCTTGCCTCCTTCCACTTCCTCACAG120410.11094259188467055No Hit
CCAGGCTAAGTCACAAGCTTCACCAGGCAGGGTAACTCTCTTGTTAGGGG119690.11027920291235131No Hit
CCAGGCTAAGTCACAAGCTTCCTAATTTTTAAACTGCAACCCTTCATCCT116360.10721102891537469No Hit
CCAGGCTAAGTCACAAGCTTAAATGACTTGACGAAGCTCATAGAAGATTA116270.10712810529383478No Hit
CCAGGCTAAGTCACAAGCTTAGAGGCAGACGGTCATCTGCTCTGGACAGG115740.106639777300322No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)