FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000709929

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000709929
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5961615
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAACAGCCACACCAGCAAGCTTATCTCAGATGATTAAATGGCAGCAGATA69398811.640939577614455No Hit
GAACAGCCACACCAGCAAGCTTGATACGGCGCCCAGCAAAATGTCGTATG1061731.780943586595243No Hit
GAACAGCCACACCAGCAAGCTTAATGATACGGCGCCCAGCAAAATGTCGT791451.3275765040177872No Hit
GAACAGCCACACCAGCAAGCTTTGTCATTTTGCTCTTAACAATAAACCTT782041.3117921905389731No Hit
GAACAGCCACACCAGCAAGCTTGCTTTGAACTCCAAGTACCTCCAAGGTC767331.287117668618319No Hit
GAACAGCCACACCAGCAAGCTTAGCTCAGTTAACTCAGCACACAGTTCGT687271.1528251992119585No Hit
GAACAGCCACACCAGCAAGCTTATGATACGGCGCCCAGCAAAATGTCGTA682961.1455956146111415No Hit
GAACAGCCACACCAGCAAGCTTGAGACGGCGCCCAGCAAAATGTCGTATG568210.9531142148562093No Hit
GAACAGCCACACCAGCAAGCTTCGCTTCTGTGAGCCCCCTTGTCTGTTGG507640.851514228946351No Hit
GAACAGCCACACCAGCAAGCTTCTCCCTGGGCAGGCTGTGTTGCTAACAC476480.7992465128996086No Hit
GAACAGCCACACCAGCAAGCTTATGAGACGGCGCCCAGCAAAATGTCGTA417180.6997768222201535No Hit
GAACAGCCACACCAGCAAGCTTATACGGCGCCCAGCAAAATGTCGTATGC382420.6414704740242367No Hit
GAACAGCCACACCAGCAAGCTTAATGAGACGGCGCCCAGCAAAATGTCGT381240.639491144597563No Hit
GAACAGCCACACCAGCAAGCTTACTGAATCAAGATCTTACTTGGTGGGGT271240.4549773844839024No Hit
GAACAGCCACACCAGCAAGCTTATGCTTAAAACTATTTAAATTCAAAAGT263450.44191045547221686No Hit
GAACAGCCACACCAGCAAGCTTCCATGTGATCTGCCTGCCTCAGCCTCCC253640.42545518286571676No Hit
GAACAGCCACACCAGCAAGCTTAGACGGCGCCCAGCAAAATGTCGTATGC250200.41968493436761684No Hit
GAACAGCCACACCAGCAAGCTTACGGCGCCCAGCAAAATGTCGTATGCCG225850.37884029746972925No Hit
GAACAGCCACACCAGCAAGCTTCTTGGCCCCAGGACTGCCCCAGGGGTGG198560.3330641109833493No Hit
GAACAGCCACACCAGCAAGCTTATGAAGTGTTACAAGATAAGGGCAACAG194200.3257506564915715No Hit
GAACAGCCACACCAGCAAGCTTCAACTACATCCTAATTACCCAGTGGGAA187290.3141598375607952No Hit
GAACAGCCACACCAGCAAGCTTTGCCTGGCTGACAAAGGGAGGAGGGGCA175640.29461815296693933No Hit
GAACAGCCACACCAGCAAGCTTGGCCAGCCTTGGCTGTTTTCTGATCCCG174360.292471083758344No Hit
GAACAGCCACACCAGCAAGCTTCATGTGATCTGCCTGCCTCAGCCTCCCA165950.27836416809874504No Hit
GAACAGCCACACCAGCAAGCTTTTCTTTAGTAAGACTAATGCTATCAAGG165710.27796159262213344No Hit
GAACAGCCACACCAGCAAGCTTCCCAGAATGGTTGCTGTCTCTGAAGGAT165340.2773409554290238No Hit
GAACAGCCACACCAGCAAGCTTATGACATAAAGGCTTTATTTATTTATTT155500.26083536088794734No Hit
GAACAGCCACACCAGCAAGCTTCGTGTCCATTTACAGTCACTTTCCATTG132030.22146683407096904No Hit
GAACAGCCACACCAGCAAGCTTTAGAGCTGAGCCTTGGAGGAGGGGTGTC131220.2201081418374048No Hit
GAACAGCCACACCAGCAAGCTTATCATAGCATCTTAAAGTTGGAAGGGAC126840.21276113938924265No Hit
GAACAGCCACACCAGCAAGCTTCCCAGTCCCTGGATTGGATTCCCACATT125280.21014439879126715No Hit
GAACAGCCACACCAGCAAGCTTTTACCTGGTGAATTTAAGAAGACATAAT124220.20836635710289914No Hit
GAACAGCCACACCAGCAAGCTTGATCAGGAGAATATTGAAGGGAGACTCG121530.20385415696921053No Hit
GAACAGCCACACCAGCAAGCTTCATAAGTGAAGGAGAAATAAAATACTTT119390.2002645256360902No Hit
GAACAGCCACACCAGCAAGCTTACAAGTTCGAGACCAGCCTGGGTAACAT117380.19689295601946788No Hit
GAACAGCCACACCAGCAAGCTTTCAAAAGGAGTACAAGTTTCATAGAGCA116840.19598716119709172No Hit
GAACAGCCACACCAGCAAGCTTAAGCAATGTGGCCTCCCAAAATGCTGGG114850.1926491395368537No Hit
GAACAGCCACACCAGCAAGCTTTACGGCGCCCAGCAAAATGTCGTATGCC107820.18085703286777158No Hit
GAACAGCCACACCAGCAAGCTTACTGAATCAAGATCTTGCTTGGTGGGGT107740.18072284104223435No Hit
GAACAGCCACACCAGCAAGCTTCAGTCTCCCAAAGTGCTGGGATTACAGG106310.17832416216075678No Hit
GAACAGCCACACCAGCAAGCTTTTTTGGGGGATGATGGAAATTTATTTAA105710.17731772346922772No Hit
GAACAGCCACACCAGCAAGCTTGACCACTTCTAGCCAGGGCCTCGGTGGC104810.17580806543193414No Hit
GAACAGCCACACCAGCAAGCTTCAGTGGCCTGCTCCATCCCCTAATGACT102610.17211779022966092No Hit
GAACAGCCACACCAGCAAGCTTTGATACGGCGCCCAGCAAAATGTCGTAT102150.17134618723282197No Hit
GAACAGCCACACCAGCAAGCTTCTACCTAAGGTCAACATTATTCTCCCAT100650.16883009050399933No Hit
GAACAGCCACACCAGCAAGCTTCGCTTCTATAATGATGATGAGCTAGTCT98590.16537465099641624No Hit
GAACAGCCACACCAGCAAGCTTCTTCAGGATAGGGAGGGGCCCCTGTCAC97410.16339532156974243No Hit
GAACAGCCACACCAGCAAGCTTTGTTCTCTTCATCTGGCCTCAGAGTTAG97330.16326112974420523No Hit
GAACAGCCACACCAGCAAGCTTAAAATCAAAGGGGATGAGTTGGGTCTTT96910.16255662266013488No Hit
GAACAGCCACACCAGCAAGCTTGGCTGCGTGCCTTTCTCCAGGTTTCCCT96360.16163405385956658No Hit
GAACAGCCACACCAGCAAGCTTGTTGACACCGGGGTAACATCCACCCAGG95260.15978891625842997No Hit
GAACAGCCACACCAGCAAGCTTGAGAAGGGAGGCTGGTCTTGGGAGAGGC93250.15641734664180762No Hit
GAACAGCCACACCAGCAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCT90150.15121741340224085No Hit
GAACAGCCACACCAGCAAGCTTTGTGCTTGGGTTTGGGCACTGCAGCTGT89030.1493387278447199No Hit
GAACAGCCACACCAGCAAGCTTCCCTTCACAGCCCTGCTGCAACCTCTCA87900.1474432683090069No Hit
GAACAGCCACACCAGCAAGCTTGGGAACCACTAGCTTTGGAGCTTCAAAG87130.14615167198821125No Hit
GAACAGCCACACCAGCAAGCTTTGGGTATATGACAGGAGGCAGCGTTTGA87100.1461013500536348No Hit
GAACAGCCACACCAGCAAGCTTGGCTGGTGATCAAATTGCCTGGGGAGCT86480.14506136340572143No Hit
GAACAGCCACACCAGCAAGCTTGGCACTATTCCAGACCCCGTGGGGCACT84980.1425452666768988No Hit
GAACAGCCACACCAGCAAGCTTATCCACCATGTGATCTGCCTGCCTCAGC84370.1415220540071776No Hit
GAACAGCCACACCAGCAAGCTTGGAGACCAGTCCTAGACCTACACGCTAC84260.1413375402470639No Hit
GAACAGCCACACCAGCAAGCTTGGAGGCTGAAGCAGCTCCACTGTGAATG83990.14088464283587585No Hit
GAACAGCCACACCAGCAAGCTTTATCCTACTGTAATAGGCTGCTCCAAAG83430.1399453000571154No Hit
GAACAGCCACACCAGCAAGCTTGCATTCTAGTCCGAGGAGCAGACAGAAT82450.1383014501942846No Hit
GAACAGCCACACCAGCAAGCTTGAAAATACCTGTAGGGAGTAGGAAACTA82040.13761371708840642No Hit
GAACAGCCACACCAGCAAGCTTAGGAGAGGCTTTCTCTGTGAGGGAGGAG81400.13654018248410876No Hit
GAACAGCCACACCAGCAAGCTTCTAGAAAATTCCAACTAAGAAACTGGAG81170.13615438098568927No Hit
GAACAGCCACACCAGCAAGCTTCCTGAGAGCAGAAAGTTTTGCTACTTTT80800.1355337437925797No Hit
GAACAGCCACACCAGCAAGCTTGGTTTCCTCACCTTGAAAGTGGGAATTA80200.13452730510105063No Hit
GAACAGCCACACCAGCAAGCTTGGTGTACATTGACATTTGAATTCAATGT80140.13442666123189775No Hit
GAACAGCCACACCAGCAAGCTTGATGCCTACATTATAAATGAGAAAATGG76660.1285893168210292No Hit
GAACAGCCACACCAGCAAGCTTACCTGTAATCCCTGCTGCTCAAACTTCA76520.12835448112633907No Hit
GAACAGCCACACCAGCAAGCTTGTAGTGGCCCTCCGTATATCTGCCCTGA76430.12820351532260973No Hit
GAACAGCCACACCAGCAAGCTTACATCATTACCAAAGAAAAAAGTAAAAT76360.12808609747526467No Hit
GAACAGCCACACCAGCAAGCTTGTTTATGGTGGCAAAAGATAGACACATC75100.12597257622305363No Hit
GAACAGCCACACCAGCAAGCTTCTGGAGGCCCTCAGCAGAAGCGAATGCC74530.12501645946610104No Hit
GAACAGCCACACCAGCAAGCTTAATTAATGCTTACAAAGTGCTCTGAGGC73950.1240435687309563No Hit
GAACAGCCACACCAGCAAGCTTCCATGGTGTTGAAGGGGACCACCGCTGC71560.12003458794303222No Hit
GAACAGCCACACCAGCAAGCTTCAGGGTGGATTATTACCTGACACAAAAA70550.11834041614562497No Hit
GAACAGCCACACCAGCAAGCTTCTTTGAGCCAGGCTTCTGCAAGGCTGGC70490.11823977227647206No Hit
GAACAGCCACACCAGCAAGCTTATAACAAAAGATATAACAGAGAGTTTAT69960.11735075143228806No Hit
GAACAGCCACACCAGCAAGCTTCTGCCCTATTTCTGGCCCCACGTCCCAA69800.11708236778121364No Hit
GAACAGCCACACCAGCAAGCTTAGAGAGATTGAGGCCAATGAGAGGTGGC68790.11538819598380641No Hit
GAACAGCCACACCAGCAAGCTTCAAGATGGTATCTTTAGGATAATTACAT67310.11290564721136806No Hit
GAACAGCCACACCAGCAAGCTTGCTTCCTCTTGGAGCAAAAGCATTTTAG67110.11257016764752503No Hit
GAACAGCCACACCAGCAAGCTTTACCCTGGATGGAGAGTGTATCTCATTT66750.11196630443260762No Hit
GAACAGCCACACCAGCAAGCTTTCCAGTTTCACATCGGAAAATGGGAACA66670.1118321126070704No Hit
GAACAGCCACACCAGCAAGCTTCCAGGGCCCGACTGCCCAGCACAGCCCA66470.11149663304322738No Hit
GAACAGCCACACCAGCAAGCTTTAACCTGAAAAATGAAATTTAGCTGCTA66370.11132889326130586No Hit
GAACAGCCACACCAGCAAGCTTCAGGAAAGAATAGGCTGCACAGGGGCGC66100.11087599585011779No Hit
GAACAGCCACACCAGCAAGCTTGGGGCTTATCCCATTTTTGGCTTGGTGA66100.11087599585011779No Hit
GAACAGCCACACCAGCAAGCTTTAAAAAGCAGCGTGCAACGCAATTTCCC65580.11000374898412595No Hit
GAACAGCCACACCAGCAAGCTTTACTAGAAAGATGGCTCAGTAAGTAACA64740.10859473481598526No Hit
GAACAGCCACACCAGCAAGCTTTGAGACGGCGCCCAGCAAAATGTCGTAT64380.10799087160106784No Hit
GAACAGCCACACCAGCAAGCTTGTACCCACGCTGTGCCACTCAGAAGGAA63250.10609541206535478No Hit
GAACAGCCACACCAGCAAGCTTGCTAGGCAAGGGCAATGGGCCTCCCAGC63080.10581025443608821No Hit
GAACAGCCACACCAGCAAGCTTTTCCATTTTTTCTTGCACAAAGCAGCTG62390.10465284994082978No Hit
GAACAGCCACACCAGCAAGCTTCCTCTCAATGGCAGGGGATACTCAGGGT61680.10346189748918708No Hit
GAACAGCCACACCAGCAAGCTTGCTTCTAGGTGCCCATCTCACCCATCCT61440.10305932201257545No Hit
GAACAGCCACACCAGCAAGCTTCCAACCCCCTCCCCTCAGTCTCACACCC61070.10243868481946586No Hit
GAACAGCCACACCAGCAAGCTTTAAAATCTATTTAACTTCCAAGGCTTAA60760.10191869149550918No Hit
GAACAGCCACACCAGCAAGCTTAAACAAGCCCTGAAAGGATCAATCTGAA60660.10175095171358768No Hit
GAACAGCCACACCAGCAAGCTTCAAGGAGAAGATGTGACAAGGAGAGGCC60600.10165030784443478No Hit
GAACAGCCACACCAGCAAGCTTTGAATCCTGAACTCCCAGCCCCAGCATT60320.10118063645505454No Hit
GAACAGCCACACCAGCAAGCTTCCCTTGCTTACTCCATAAAAGATTCCCT59620.10000645798160397No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)