FastQCFastQC Report
Mon 12 Sep 2022
EGAF00000709930

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000709930
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3759020
Sequences flagged as poor quality0
Sequence length101
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAATTAC73897419.65868763667126No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTA596241.5861580943969438No Hit
ACATTTGGCCACAAGCTTTCTGGAAAATTGATGAATATTTGAAAATTAAT173510.4615830721837075No Hit
ACATTTGGCCACAAGCTTATAGGTTGGAAGTGAGTGGTTTGACATAGTTA162570.43247974206043066No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTCAGTTTGCCAGTA154010.4097078493862762No Hit
ACATTTGGCCACAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAG114710.30515932344068397No Hit
ACATTTGGCCACAAGCTTCTAGAAATAATAAGTGAGTTTAGCAAGTTAAC107350.2855797521694484No Hit
ACATTTGGCCACAAGCTTACAAATTTCTAGGCAAAAAGCACACTTCAGGA100230.2666386451787966No Hit
ACATTTGGCCACAAGCTTACCTATTTTTAGGATCACTGGACACCTGGCCA91130.2424302078733287No Hit
ACATTTGGCCACAAGCTTATAAACTGTATACCCTAAAGAGTGAATTTTAC81840.2177163196790653No Hit
ACATTTGGCCACAAGCTTACTCTCAATATAAAAGATTCTGGTGCTCTAAG79640.21186373044038073No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTTGGTTTGCCAGTA61840.1645109629637512No Hit
ACATTTGGCCACAAGCTTAATGATAATCTAAAGGATGATCTGGTCCTTAC57320.1524865523460902No Hit
ACATTTGGCCACAAGCTTTCCTTGCTCCAGAGTGAGACACTATCTCCATC54900.14604870418353721No Hit
ACATTTGGCCACAAGCTTCAATGCCTGAAACAAACAATATACTTTGGTAG46370.12335661954445575No Hit
ACATTTGGCCACAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAA45120.12003128474974861No Hit
ACATTTGGCCACAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTACAG43660.11614729370953067No Hit
ACATTTGGCCACAAGCTTACAAGCAGAGAAGGAGCAGAGTGTCCGCAATC41030.10915078930146688No Hit
ACATTTGGCCACAAGCTTAACATGTCCACAAACAATCTCTTTTTTCTAGC39700.10561263307989849No Hit
ACATTTGGCCACAAGCTTTTCACATTTTTTATATCAAGAAATAAAGCAAG38890.10345781613292826No Hit
ACATTTGGCCACAAGCTTTCACCTCTTGTTAAAGCAGTAAATGGTCTTTG37770.10047831615687067No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)