FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000709934

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000709934
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10669865
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCATATGCC497418346.61898721305284No Hit
CCAGGCTAAGTCACAAGCTTGATCTCCTTTGAAAAGAGCTCAGCTTAAAG851040.7976108413742817No Hit
CCAGGCTAAGTCACAAGCTTAAGGGGCATAGCTGGACCCCTGCATATATG471910.442283009203959No Hit
CCAGGCTAAGTCACAAGCTTTATTGAAGTATAATTGATATACAAAGACCT411140.3853282117440099No Hit
CCAGGCTAAGTCACAAGCTTCACAGAGGACACACCAAGGAGGCTGAATCT394590.36981723761265956No Hit
CCAGGCTAAGTCACAAGCTTGTGAGATTCACCTTTCCTCGCTTTATATCT333650.31270311292598363No Hit
CCAGGCTAAGTCACAAGCTTGGTATGGAGGAGGAACAGAAAAAATGCCAG314080.29436173747277966No Hit
CCAGGCTAAGTCACAAGCTTCTGATTTGTACGTCAGGGGTGAAGTGCAGG302310.2833306700693964No Hit
CCAGGCTAAGTCACAAGCTTGCCAGTAGAAATAGTGACTCTCACATACTG254830.23883151286356483No Hit
CCAGGCTAAGTCACAAGCTTCAGAGAACCCATCTTGAAAATGGTAACACT252450.23660093168938875No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGCCTCATCACACCATATGCC251280.23550438548191566No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACGCCATATGCC225170.2110335978946313No Hit
CCAGGCTAAGTCACAAGCTTGAAACCATCATTCTCAGCAAACTAACACAG224910.21078992095963728No Hit
CCAGGCTAAGTCACAAGCTTATCAAGAACAAACTAAAAGAAGATTGTAAG216270.20269234896598973No Hit
CCAGGCTAAGTCACAAGCTTTGCTGATCCTGACATACTGACATATATGTT214190.20074293348603753No Hit
CCAGGCTAAGTCACAAGCTTTTATTTATTTATTCTTTTTTTTTAAAGCCG214020.20058360625931068No Hit
CCAGGCTAAGTCACAAGCTTCCCTAAACAGGGCTTGAGCTCTGGAAGGAG208890.19577567288808248No Hit
CCAGGCTAAGTCACAAGCTTCTGTTATAAGGTCTCATCACACCATATGCC208780.1956725788002004No Hit
CCAGGCTAAGTCACAAGCTTCACAGAGGACACACCGAGGAGGCTGAATCT204610.19176437565048857No Hit
CCAGGCTAAGTCACAAGCTTACTTTAACCCTTAAAGAATGAGCTTTAAAA195540.18326379949512014No Hit
CCAGGCTAAGTCACAAGCTTTGGAAAAGTGTTTAGGGCCAATCAGTAGAA193860.18168927160746645No Hit
CCAGGCTAAGTCACAAGCTTGCATAATTCTAGCCCCAGTGATTCTTCTTT183900.1723545705592339No Hit
CCAGGCTAAGTCACAAGCTTGGCTCTGTCATTTACTGGCCTCAAAATGTC182980.17149232909694734No Hit
CCAGGCTAAGTCACAAGCTTGGACAAGAGCCCCCAACTCTGATCTCAATT179840.16854946149740413No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCACCACACCATATGCC178790.16756538156762057No Hit
CCAGGCTAAGTCACAAGCTTATTGTACTTAAATCCACAAAAATTAGGTAC176400.16532542820363708No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCCCATCACACCATATGCC175190.1641913932369341No Hit
CCAGGCTAAGTCACAAGCTTTGTTCCAATTATCTACTGCTACATAACAGC174600.1636384340382938No Hit
CCAGGCTAAGTCACAAGCTTTCATTTTAATAAAAGTGTCTCCTATTTTTT170270.1595802758516626No Hit
CCAGGCTAAGTCACAAGCTTCTTTTCCTGCTCTTATTGCATGCTCAGGTA169260.1586336846811089No Hit
CCAGGCTAAGTCACAAGCTTCATCTAATGCATTGGCTTTTTGGCATCTCC165900.15548462890580153No Hit
CCAGGCTAAGTCACAAGCTTTGGATTTGAGTTTGTGTTTCCAAACACACT164200.1538913566385329No Hit
CCAGGCTAAGTCACAAGCTTCATTCATTCACAAGTCCTCTCTGGATCCAT159400.14939270553095096No Hit
CCAGGCTAAGTCACAAGCTTTCGTTATAAGGTCTCATCACACCATATGCC157290.1474151734815764No Hit
CCAGGCTAAGTCACAAGCTTATTGGAAAGCATTTAAGAACGTTAGAGCGT156270.1464592101212152No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAGGGTCTCATCACACCATATGCC155170.14542826924239435No Hit
CCAGGCTAAGTCACAAGCTTTTATACCTTCTAGACCAGGAGATTATGGAC154090.1444160727431884No Hit
CCAGGCTAAGTCACAAGCTTTTGCTATAAGGTCTCATCACACCATATGCC149450.14006737667252583No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCGCACCATATGCC146690.13748065228566622No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCATACGCC145560.13642159483742297No Hit
CCAGGCTAAGTCACAAGCTTGAAAAATTTCATCTGAAAATGAATGTTTTG142820.13385361483017827No Hit
CCAGGCTAAGTCACAAGCTTCCTTTCTCGATGTGAAAAGAACAAACCTAT142480.13353496037672455No Hit
CCAGGCTAAGTCACAAGCTTGCTTTTGTATATGTAAGGAACCACACAGAG141300.13242904197944397No Hit
CCAGGCTAAGTCACAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTAC138550.1298516897823918No Hit
CCAGGCTAAGTCACAAGCTTTTCTGAGAGACAAGATGGTTATTTGTACCA137690.12904568145895004No Hit
CCAGGCTAAGTCACAAGCTTCAGAGAGAAGATGACATCAAAATAAGGGCC136890.12829590627435303No Hit
CCAGGCTAAGTCACAAGCTTCCCTCCACTTTACTCATCAGCAATGCAGCT136500.12793039087186203No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCGTCACACCATATGCC134660.12620590794728892No Hit
CCAGGCTAAGTCACAAGCTTCTTTTAAATATAGTAAGGAAGAGTTTCTCT131120.12288815275544723No Hit
CCAGGCTAAGTCACAAGCTTCTGCTAGAAGCCAGTATCACAAATCTAGAA130750.12254138173257113No Hit
CCAGGCTAAGTCACAAGCTTTGCCTAAGACAGACACACGCATGCTCAGGT124870.11703053412578322No Hit
CCAGGCTAAGTCACAAGCTTAGGGATGGTCTTCTCTAGAGCTTCCAAACT124130.116336992080031No Hit
CCAGGCTAAGTCACAAGCTTTCTTGTCAACAAATAAAATGAATACTATTC122650.11494990798852657No Hit
CCAGGCTAAGTCACAAGCTTTTTCCTCTAGGTACAGTGTTAGACAGTACA122010.11435008784084898No Hit
CCAGGCTAAGTCACAAGCTTCACCAGGCAGGGTAACTCTCTTGTTAGGGG120310.11275681557358036No Hit
CCAGGCTAAGTCACAAGCTTCAATTCTTGCCTCCTTCCACTTCCTCACAG118140.11072305038536101No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCGTATGCC117640.1102544408949879No Hit
CCAGGCTAAGTCACAAGCTTTTGTTGTAAGGTCTCATCACACCATATGCC117410.11003888052941627No Hit
CCAGGCTAAGTCACAAGCTTAAATGACTTGACGAAGCTCATAGAAGATTA116200.1089048455627133No Hit
CCAGGCTAAGTCACAAGCTTCCTAATTTTTAAACTGCAACCCTTCATCCT115660.10839874731311033No Hit
CCAGGCTAAGTCACAAGCTTAGAGGCAGACGGTCATCTGCTCTGGACAGG114960.10774269402658797No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAAGTCTCATCACACCATATGCC108560.10174449254981202No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)