FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000709938

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000709938
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7642141
Sequences flagged as poor quality0
Sequence length101
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAATTAC185257824.241609779249035No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTA2170982.840800765125899No Hit
ACATTTGGCCACAAGCTTTCTGGAAAATTGATGAATATTTGAAAATTAAT844121.1045595730306468No Hit
ACATTTGGCCACAAGCTTATAGGTTGGAAGTGAGTGGTTTGACATAGTTA547110.7159119414310727No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTCATTAC327170.4281130117855716No Hit
ACATTTGGCCACAAGCTTACAAATTTCTAGGCAAAAAGCACACTTCAGGA313440.41014684235739696No Hit
ACATTTGGCCACAAGCTTAATGATAATCTAAAGGATGATCTGGTCCTTAC252610.3305487297342459No Hit
ACATTTGGCCACAAGCTTCTAGAAATAATAAGTGAGTTTAGCAAGTTAAC245480.3212188835563228No Hit
ACATTTGGCCACAAGCTTACCTATTTTTAGGATCACTGGACACCTGGCCA239900.3139172648083829No Hit
ACATTTGGCCACAAGCTTATAAACTGTATACCCTAAAGAGTGAATTTTAC225220.2947079882457024No Hit
ACATTTGGCCACAAGCTTACTCTCAATATAAAAGATTCTGGTGCTCTAAG210020.2748182740936081No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTCAGTTTGCCAGTA199530.26109175426101144No Hit
ACATTTGGCCACAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAG182860.23927849538499749No Hit
ACATTTGGCCACAAGCTTTTCCTGACACTTAATGAAATCTTTTTAATTAC170780.2234714067693857No Hit
ACATTTGGCCACAAGCTTTTCACATTTTTTATATCAAGAAATAAAGCAAG123680.16183946357440931No Hit
ACATTTGGCCACAAGCTTTCCTTGCTCCAGAGTGAGACACTATCTCCATC119670.15659224293296867No Hit
ACATTTGGCCACAAGCTTTCACCTCTTGTTAAAGCAGTAAATGGTCTTTG113150.14806060238878083No Hit
ACATTTGGCCACAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAA111760.14624174037092486No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTTGGTTTGCCAGTA111040.14529959601635195No Hit
ACATTTGGCCACAAGCTTCAATGCCTGAAACAAACAATATACTTTGGTAG96970.12688852508740678No Hit
ACATTTGGCCACAAGCTTAACATGTCCACAAACAATCTCTTTTTTCTAGC92380.12088235482700463No Hit
ACATTTGGCCACAAGCTTTTTTTGTTTTGTTTTTGTATTGTTTTCTTTCC92130.12055522137055572No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAGATCTTTTTAATTAC83140.10879150227665257No Hit
ACATTTGGCCACAAGCTTTTGCTGATACTTAATGAAATCTTTTTAATTAC81510.10665859214060562No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAGTCTTTTTAATTAC78730.10302086810489364No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGGAATCTTTTTAATTAC78210.10234043051547989No Hit
ACATTTGGCCACAAGCTTTTGCTGACATTTAATGAAATCTTTTTAATTAC77160.10096646999839443No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCCTTTTAATTAC76950.10069167789497735No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)