FastQCFastQC Report
Mon 12 Sep 2022
EGAF00000709943

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000709943
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3530875
Sequences flagged as poor quality0
Sequence length101
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGCATTAGATGAAGCTTGTGACTTAGCCTGGGTGAGTCAGGGGTGAT314180.8898077671965164No Hit
CAATGCATTAGATGAAGCTTCTTTTCCTGCTCTTATTGCATGATTCCACT254900.7219173717562927No Hit
CAATGCATTAGATGAAGCTTTTGTTATAAGGTCTCATCACACCATATGCC236470.6697206783021206No Hit
CAATGCATTAGATGAAGCTTAGAAGGGCATTTTCTAACCATTACAAATTG148180.41966934541721246No Hit
CAATGCATTAGATGAAGCTTGTACAAGGAATGAGCCCACTTTCCCAGCAG134960.3822282012249088No Hit
CAATGCATTAGATGAAGCTTGGTACAAGGAATGAGCCCACTTTCCCAGCA125940.3566821255354551No Hit
CAATGCATTAGATGAAGCTTACTTTAACCCTTAAAGAATGAGCTTTAAAA122430.3467412468580734No Hit
CAATGCATTAGATGAAGCTTGTTTGGCCGTTTTAGGGTTTGTTGGAATTT120380.34093532056501574No Hit
CAATGCATTAGATGAAGCTTTTATCTAGAGAAATCCCAATTATGCAGGAT119290.3378482670726095No Hit
CAATGCATTAGATGAAGCTTCACCAGGCAGGGTAACTCTCTTGTTAGGGG115110.32600984175310654No Hit
CAATGCATTAGATGAAGCTTATTTAAATTACTCAAATTAAGTATATCTTT107950.30573158211491486No Hit
CAATGCATTAGATGAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTAC106680.30213473997238643No Hit
CAATGCATTAGATGAAGCTTAATTTACTTCAACAATTATTCAGTGGATTA106370.30125677063050943No Hit
CAATGCATTAGATGAAGCTTGGACAAGAGCCCCCAACTCTGATCTCAATT104550.2961022409459412No Hit
CAATGCATTAGATGAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAG103740.29380819202039155No Hit
CAATGCATTAGATGAAGCTTTTGATAAATATTAGCTATGGTCATTATCCT99070.28058200870888944No Hit
CAATGCATTAGATGAAGCTTCTTTACCTACAAAAAGAAATCAAGATATTC96070.27208553120685386No Hit
CAATGCATTAGATGAAGCTTTAGACCCAGGCAACTCTAAATATGACGCAC95880.27154742096505824No Hit
CAATGCATTAGATGAAGCTTATTCCCTTTTCGGGACCTCTGTTCTGTTTA95780.2712642050483237No Hit
CAATGCATTAGATGAAGCTTAATTTTTGCTGTCACACTAGATTATTGGAA94440.26746911176408117No Hit
CAATGCATTAGATGAAGCTTTTTCCTCTAGGTACAAGGAATGAGCCCACT91020.2577831274117605No Hit
CAATGCATTAGATGAAGCTTAAAGCCTCTTTTTTGTTCTTTTGTTCCTCT85990.24353736680001414No Hit
CAATGCATTAGATGAAGCTTCTGAATAGGTGGGAATGAGTTGCATTGTAT85650.24257443268311682No Hit
CAATGCATTAGATGAAGCTTCCTAATTTTTAAACTGCAACCCTTCATCCT85590.24240450313307604No Hit
CAATGCATTAGATGAAGCTTAATTGCTAATTAATTAAAAGATGATTGGAT85460.2420363224413212No Hit
CAATGCATTAGATGAAGCTTTGGGTGGGCAACATTATCTGTCTGGAATTT85340.2416964633412398No Hit
CAATGCATTAGATGAAGCTTCCCAAAGTGATGGCACCTCAAGGGTCAGGA84600.23960066555740434No Hit
CAATGCATTAGATGAAGCTTCAAGAGGGAAGATGACTTCTCAAACACCCA83160.2355223563564272No Hit
CAATGCATTAGATGAAGCTTGTAATCATTTGGACGACGCCTTCATTTCCC82670.2341345983644281No Hit
CAATGCATTAGATGAAGCTTAAGGGGCATAGCTGGACCCCTGCATATATG82420.23342655857259176No Hit
CAATGCATTAGATGAAGCTTCATACAATGCAGCATGTGTAATACCTCATT82270.23300173469749No Hit
CAATGCATTAGATGAAGCTTAATGGAGACCTTTAAAATGCAAAATTTTGA82200.23280348355577585No Hit
CAATGCATTAGATGAAGCTTGAATAAGTTATCTCCTGGGGTGCCTGTTTT80970.22931992777994126No Hit
CAATGCATTAGATGAAGCTTTGAGCATCTGTAGTTTAAAAAACTTTCCAG80280.22736573795447304No Hit
CAATGCATTAGATGAAGCTTACTGGGATAGCCCAATCTGACTTTTCTTTT79870.2262045526958615No Hit
CAATGCATTAGATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGA78710.22291924806174104No Hit
CAATGCATTAGATGAAGCTTTAATTTTGTGTGTTATTTGGAGATGGAAGT78160.2213615605197012No Hit
CAATGCATTAGATGAAGCTTTATTGAAGTATAATTGATATACAAAGACCT77900.22062519913619147No Hit
CAATGCATTAGATGAAGCTTCCACCTCCCAGCCTCCTTAAACCTCACCTT77560.2196622650192941No Hit
CAATGCATTAGATGAAGCTTCCTGTACAAGGAATGAGCCCACTTTCCCAG77430.21929408432753922No Hit
CAATGCATTAGATGAAGCTTAGATTCAAAGGTGAAATGATTCATCTCCAT76170.21572556377668425No Hit
CAATGCATTAGATGAAGCTTTTCCAATTCTACTTTTCTGATTCAGTGCTT75900.21496088080150103No Hit
CAATGCATTAGATGAAGCTTTGACTTTCACCCTCACCAAGATGTAAGGAG75330.21334655007611428No Hit
CAATGCATTAGATGAAGCTTATTGTATAATAAAGTGTTGAATGTCTTATG74460.21088257160052393No Hit
CAATGCATTAGATGAAGCTTTGATGACTACACCCAGATATTATAAGTAGG74110.20989131589195312No Hit
CAATGCATTAGATGAAGCTTCTTCCTGGGTTTCTTAGAATATATGTTCTC70710.20026197472297944No Hit
CAATGCATTAGATGAAGCTTACATAGACCGACAAAACTGAAAAAGTACAA70670.20014868835628563No Hit
CAATGCATTAGATGAAGCTTCAATTTCCACATACCTAAAATGGCATCCAA70450.19952561333946967No Hit
CAATGCATTAGATGAAGCTTTAGATTCACTTTCTCTTATCACATGTTTCA68760.19473926434665628No Hit
CAATGCATTAGATGAAGCTTACTCTACTGGGACCCAACCCTAGTTAGACC68120.19292668247955536No Hit
CAATGCATTAGATGAAGCTTACAGCCAGAAGAAGAGATGAGAATGTGCAA67510.19119906538747478No Hit
CAATGCATTAGATGAAGCTTCATTCAATGTAAGGGTACAAGGAATGAGCC66850.18932984033702693No Hit
CAATGCATTAGATGAAGCTTGAGGAGCTCCTCCCCAATGTTTTGATGTTG64750.18338230608560202No Hit
CAATGCATTAGATGAAGCTTTCAGCTACTAACTGTGTGATCTAAGGGAAG63690.18038021736821608No Hit
CAATGCATTAGATGAAGCTTTGGCTCCGTGCACACTTTTCCTTCCCCATA63220.17904910255956386No Hit
CAATGCATTAGATGAAGCTTCCAAGGCCCTCCTGGAGGGCCAGGAATCGG62440.1768400184090346No Hit
CAATGCATTAGATGAAGCTTCCTTTCTCGATGTGAAAAGAACAAACCTAT61920.17536729564201506No Hit
CAATGCATTAGATGAAGCTTCCCTGATACAGCATCAGTGAGAACAACAGA61880.17525400927532128No Hit
CAATGCATTAGATGAAGCTTGAAGCATTCCGGCCCCACCACTCTGTGCCC59790.1693347966155698No Hit
CAATGCATTAGATGAAGCTTGCACGGGTGAATGCCACCAGTTGTGCCGAT59580.16874004319042732No Hit
CAATGCATTAGATGAAGCTTTAAAATGCATCTGTCACAGGCTAATAAAAG59430.1683152193153255No Hit
CAATGCATTAGATGAAGCTTGAGGAAAAAAGGAGATGTTGTAATTTGCAC59330.16803200339859098No Hit
CAATGCATTAGATGAAGCTTGTAGGGCTGCATGGACCAATATGGTAACCA59090.16735228519842815No Hit
CAATGCATTAGATGAAGCTTATTGAACTCTTACAACACCATATCTTTATT57610.16316068963075725No Hit
CAATGCATTAGATGAAGCTTTCCATAACCTTCCAGACAAGGTTAGCCTCC57590.16310404644741036No Hit
CAATGCATTAGATGAAGCTTTTTGATGTGCTGCTGGATTCGTTTTGCCAG56850.16100824866357488No Hit
CAATGCATTAGATGAAGCTTTTCTCATCATCTCTCCGGCTTTCTCCCCAA56020.15865755655467836No Hit
CAATGCATTAGATGAAGCTTGAATCTGCACTGACTTCCAGTTTGTGCCTT55900.15831769745459695No Hit
CAATGCATTAGATGAAGCTTTTCAGATTAAAGGAACAACGTCAAGAAAAG55300.15661840195418983No Hit
CAATGCATTAGATGAAGCTTGTTTTGTGGGACAGGAAGATAAAGAAGAGG54820.15525896555386412No Hit
CAATGCATTAGATGAAGCTTTTGTTTCCTTTTGGGACTATATCAGAACTA54700.1549191064537827No Hit
CAATGCATTAGATGAAGCTTATTGTACAAGGAATGAGCCCACTTTCCCAG54160.15338974050341628No Hit
CAATGCATTAGATGAAGCTTATTGACATAATACATCTATATCACATCCTC51610.14616773462668603No Hit
CAATGCATTAGATGAAGCTTGGACTCAACCCAAGAGGATTTTAAAGAATT51130.14480829822636032No Hit
CAATGCATTAGATGAAGCTTGAAAAATTTCATCTGAAAATGAATGTTTTG51090.14469501185966652No Hit
CAATGCATTAGATGAAGCTTCCTGGATGAGGCACCTAGTGGCGTCCCCTA50780.14381704251778948No Hit
CAATGCATTAGATGAAGCTTTGTTAGGAGAGTACAAGGAATGAGCCCACT50630.14339221864268772No Hit
CAATGCATTAGATGAAGCTTTTTGATATTGATATCAGTGAGAACTGTTAA50500.14302403795093285No Hit
CAATGCATTAGATGAAGCTTTCCCCAACCCTCCATTGCAGACCAAGATCA50280.1424009629341169No Hit
CAATGCATTAGATGAAGCTTCTTTTAAATATAGTAAGGAAGAGTTTCTCT49810.14106984812546466No Hit
CAATGCATTAGATGAAGCTTTGCTGACTACTGCTTTAGGATTTAAAATAG49720.1408149538004036No Hit
CAATGCATTAGATGAAGCTTAGTGGAAAAAAACAGCTATCTTATTATGCT49710.14078663220873014No Hit
CAATGCATTAGATGAAGCTTCAACTCACTGTCCTCCTTAAACTTTCCTCT49420.13996530605020002No Hit
CAATGCATTAGATGAAGCTTTAATGTGCCTGCTAAGGTACAAGGAATGAG48110.13625517754097782No Hit
CAATGCATTAGATGAAGCTTCAGTCGTCTCTCCACAAAACCAGGTTATAT47480.13447091726555033No Hit
CAATGCATTAGATGAAGCTTCCAATAAGAGACATTTGGAGTCACCAGGCT46550.13183700923991928No Hit
CAATGCATTAGATGAAGCTTTTATACCTTCTAGACCAGGAGATTATGGAC46460.13158211491485822No Hit
CAATGCATTAGATGAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTAC46410.13144050695649095No Hit
CAATGCATTAGATGAAGCTTCTTTTCCTTCATTTCATTTGTTGCCTCCTC46130.1306475023896343No Hit
CAATGCATTAGATGAAGCTTGGGCTGGTTGCAGTGGCTCATGCCTGTAAT45690.1294013523560024No Hit
CAATGCATTAGATGAAGCTTGGTATGGAGGAGGAACAGAAAAAATGCCAG45340.12841009664743158No Hit
CAATGCATTAGATGAAGCTTAGGGATGGTCTTCTCTAGAGCTTCCAAACT45200.12801359436400325No Hit
CAATGCATTAGATGAAGCTTTCTTGTCAACAAATAAAATGAATACTATTC43620.12353878287959784No Hit
CAATGCATTAGATGAAGCTTTACAAGGGGTATCATTTATCTCCCAGCGTC43600.12348213969625094No Hit
CAATGCATTAGATGAAGCTTTGGGACCATATAGAACACACCTAGTACAAG43480.1231422805961695No Hit
CAATGCATTAGATGAAGCTTTGCTATTTAGATTGTTAAATCTTTGGATGT43340.12274577831274118No Hit
CAATGCATTAGATGAAGCTTTATGGAGTCAGTAACCAGTCTCTCTTACTC43340.12274577831274118No Hit
CAATGCATTAGATGAAGCTTTTCTGAGAGACAAGATGGTTATTTGTACAA43050.12192445215421106No Hit
CAATGCATTAGATGAAGCTTATGTGCCGTGAGACTGATGACAAATTCCTT41640.11793110772825434No Hit
CAATGCATTAGATGAAGCTTCAACCAACATCTGACCACAATCCAGTGAGA41260.11685488724466316No Hit
CAATGCATTAGATGAAGCTTTGCCTAAGACAGACACACGCATGCACACAC41070.11631677700286756No Hit
CAATGCATTAGATGAAGCTTCTCTGTCACAAATCACATTTTCCAACCCGG40930.11592027471943923No Hit
CAATGCATTAGATGAAGCTTTCATTTTAATAAAAGTGTCTCCTATTTTTT40780.11549545084433746No Hit
CAATGCATTAGATGAAGCTTAGAATTAGGAGGTCAGGTCTGGTTCAACTG40530.11478741105250116No Hit
CAATGCATTAGATGAAGCTTCAATGAAAGTTTCCATAAAAAACACACTCA39970.11320140191878783No Hit
CAATGCATTAGATGAAGCTTCGGTCTTCTGAAAAATACACGAATATGAGG39810.11274825645201261No Hit
CAATGCATTAGATGAAGCTTCCAGCCTCTCCTGATCCCAATCTTCCTCTT39530.11195525188515594No Hit
CAATGCATTAGATGAAGCTTTCTTTATACTAATACTGCTTTGTCTTATGC39480.11181364392678869No Hit
CAATGCATTAGATGAAGCTTCATCCATGTCCCTGCAAAGGACAATGAACT39260.11119056890997274No Hit
CAATGCATTAGATGAAGCTTTACAATCTTTTAAATGCTCTTCACTTAGAA39230.1111056041349524No Hit
CAATGCATTAGATGAAGCTTCCACACATGGAGTTTCTCTCTCTCCTTTCT39120.11079406662654441No Hit
CAATGCATTAGATGAAGCTTGGGAATAATAATGAAAACATAATTGCTCCA38720.10966120295960632No Hit
CAATGCATTAGATGAAGCTTGGTTCAGAGAAAAGCCATTCCCTGTCTCAT38440.10886819839274968No Hit
CAATGCATTAGATGAAGCTTCTGTCCATTCAGTTCATTCATGCGTTCATT38090.10787694268417886No Hit
CAATGCATTAGATGAAGCTTCTTCACTGTTTTCTCCAAAAATCTGAGTTG37910.10736715403405672No Hit
CAATGCATTAGATGAAGCTTTTTGATGTGCTGCTGGATTCAGTTTGCCAG37510.10623429036711862No Hit
CAATGCATTAGATGAAGCTTTCCAAATATCCACTTCCAGATTCTATAAAA37070.10498814033348673No Hit
CAATGCATTAGATGAAGCTTTGTAACTTGTAAATAACCCAGGCAAATTTC36920.10456331645838496No Hit
CAATGCATTAGATGAAGCTTGAGGAGCAAGGAGAGCCAGTCCATGTCTCA36720.10399688462491591No Hit
CAATGCATTAGATGAAGCTTTACAGTACAAGGAATGAGCCCACTTTCCCA36700.10394024144156902No Hit
CAATGCATTAGATGAAGCTTGTAAGCGGGTAAATTTGCTTCATTCTCTGT36370.10300562891634508No Hit
CAATGCATTAGATGAAGCTTAAAGTATTTAATTTATCCAAACCACATGGG35330.10006018338230607No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)