FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000710064

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710064
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5958477
Sequences flagged as poor quality0
Sequence length101
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTGCGTGCAGATTCAAGCTTTTGAAATGGTTTCAGCTCTGTTCAATTG3182015.340307598737059No Hit
AAGTGCGTGCAGATTCAAGCTTATTGAAGTTTAGGGAAAGAAGGTTGCTG736581.236188374982399No Hit
AAGTGCGTGCAGATTCAAGCTTGCCAGAAATATATAAACACCTACCCCAG345670.5801314664804446No Hit
AAGTGCGTGCAGATTCAAGCTTGGATGAACGTCCGTGGTTGGCAGTACTC320560.5379898252523254No Hit
AAGTGCGTGCAGATTCAAGCTTCAGTGTGTCCAGAGTTTTTATTGGGGCT317100.5321829722595219No Hit
AAGTGCGTGCAGATTCAAGCTTAGGGAACACTGTATGTGTAATTCCAATG267260.44853743666376494No Hit
AAGTGCGTGCAGATTCAAGCTTCATGTCAATAAACGCATCTTGGTGTCTG267160.4483696085425856No Hit
AAGTGCGTGCAGATTCAAGCTTTTCTGGAATATTATTTAAATTAAAATCT266840.44783255855481185No Hit
AAGTGCGTGCAGATTCAAGCTTATCCACCATGTCAATAAACGCATCTTGG223240.3746594977206424No Hit
AAGTGCGTGCAGATTCAAGCTTCTACAGTTACCTTTATTTTGCATGTCAA206590.34671611554429094No Hit
AAGTGCGTGCAGATTCAAGCTTTGATCCTTGGTGATTGAGAGGATAGTGA183880.30860234922447466No Hit
AAGTGCGTGCAGATTCAAGCTTTCCATGTCAATAAACGCATCTTGGTGTC166050.2786785952182076No Hit
AAGTGCGTGCAGATTCAAGCTTAGGACAAAGGATTGACAATTGGTTGCAG158910.2666956673660065No Hit
AAGTGCGTGCAGATTCAAGCTTTTAAAAAGAACTGTGAACAAATACATGT158240.26557121895410524No Hit
AAGTGCGTGCAGATTCAAGCTTAAATCTTATCACTCATTTGGCACATAGC155070.26025106751272176No Hit
AAGTGCGTGCAGATTCAAGCTTGTGCCACCATGTCAATAAACGCATCTTG153880.2582539128706883No Hit
AAGTGCGTGCAGATTCAAGCTTCTAGTGCCTGATGCTCTATTATTAGTTT143160.2402627382802686No Hit
AAGTGCGTGCAGATTCAAGCTTGAAAGCAAGGCCTGTACTCCACTTGAAA140900.23646982274161668No Hit
AAGTGCGTGCAGATTCAAGCTTTTTTTGCCTGTAATGTTTTATTTTAAAA140380.23559711651148438No Hit
AAGTGCGTGCAGATTCAAGCTTATTTTTGTTAACAAGCAGTCTGTGTGTG139190.2335999618694509No Hit
AAGTGCGTGCAGATTCAAGCTTTCCTTACCTAGGTTCACAGCCACTGACA134560.22582951985884986No Hit
AAGTGCGTGCAGATTCAAGCTTCTCTACTTTTACTTCAAGGCACTCTTAA134170.22517499018625062No Hit
AAGTGCGTGCAGATTCAAGCTTAGTCCTCCGTTATACTAGTGGGAACAAT125090.2099361967831713No Hit
AAGTGCGTGCAGATTCAAGCTTCACAGTCTGGGGAGGTGAAAGGGAAGCA120070.201511225099971No Hit
AAGTGCGTGCAGATTCAAGCTTATTTTTTAGAAGACACAACATCAATAAA118300.19854066735509762No Hit
AAGTGCGTGCAGATTCAAGCTTAGGTGTCCAATTTGGGGCTGCCTGATTA116870.1961407252222338No Hit
AAGTGCGTGCAGATTCAAGCTTATATAAATGTGAGGGGCACCAGTGCAGT116560.19562045804657802No Hit
AAGTGCGTGCAGATTCAAGCTTGAGGGGTGAGGAAAAAAAACCTAGAGGG115990.19466383775585608No Hit
AAGTGCGTGCAGATTCAAGCTTATGGAGGCCAGATATGGCAAAGTTGTGT115690.1941603533923182No Hit
AAGTGCGTGCAGATTCAAGCTTGTTGGCGATTCTAACATGTCAATAAACG115120.19320373310159628No Hit
AAGTGCGTGCAGATTCAAGCTTCCTCTCCTTTCTTGGCCTTTGCCCACTT110600.18561790202429243No Hit
AAGTGCGTGCAGATTCAAGCTTTAGTGTTTCCAGAAGCAGCTTCAAGTTG110040.18467806454568844No Hit
AAGTGCGTGCAGATTCAAGCTTACAAGCAGAGAAGGAGCAGAGTGTCCGC108860.18269769271577282No Hit
AAGTGCGTGCAGATTCAAGCTTTTTTTAATACGTACATCTATCCACATGT108780.18256343021882943No Hit
AAGTGCGTGCAGATTCAAGCTTTTGATTTTTATTTATTTATTTCTCTGAA108650.18234525366129634No Hit
AAGTGCGTGCAGATTCAAGCTTTTTAAAGTAAACTAAATACTTAAATTAT104100.17470907414763875No Hit
AAGTGCGTGCAGATTCAAGCTTCCACTGCGAAAGCCATCACCACACACGA103590.17385315072962437No Hit
AAGTGCGTGCAGATTCAAGCTTGTATCATGTCAATAAACGCATCTTGGTG103580.17383636791750645No Hit
AAGTGCGTGCAGATTCAAGCTTAAAAGGCCACTCTCTCTATAATATTTCA98710.1656631384160751No Hit
AAGTGCGTGCAGATTCAAGCTTCCACTGTGGGGGTAACATGTCAATAAAC97630.1638505947073388No Hit
AAGTGCGTGCAGATTCAAGCTTCTTCTGTTCTCTTTAACTCATCTACGTG97580.16376668064674915No Hit
AAGTGCGTGCAGATTCAAGCTTCCTCAGATCACTGAGATAGGAATGAAAA97120.16299467128932443No Hit
AAGTGCGTGCAGATTCAAGCTTCTAGAATAATTTATATGTGATAGAGGAT95670.16056116353222474No Hit
AAGTGCGTGCAGATTCAAGCTTGGGTACTCCTGGTCTAGTGCTCTTTCCT89700.15054182469782126No Hit
AAGTGCGTGCAGATTCAAGCTTCTGTAGTGATTGAAAGCATGTCAATAAA87800.1473530903954148No Hit
AAGTGCGTGCAGATTCAAGCTTCAGATTGTGAAGTTATCCTTAGACTAAG86900.1458426373048012No Hit
AAGTGCGTGCAGATTCAAGCTTTAATATTTAATACTGCTATCTTTTAGTA86690.14549019825032472No Hit
AAGTGCGTGCAGATTCAAGCTTAGCGTTCCAATAACGGAACACTAGGCAT86240.14473497170501792No Hit
AAGTGCGTGCAGATTCAAGCTTCACCTATTTTAGAAAATTTTCATGTCAA85570.1436105232931167No Hit
AAGTGCGTGCAGATTCAAGCTTATTTTTCCCATTTTGAAAATGCATTTAT84430.1416972827116728No Hit
AAGTGCGTGCAGATTCAAGCTTTCCTGGTGATTCTAACTTTGAGAACCAT83100.1394651686999883No Hit
AAGTGCGTGCAGATTCAAGCTTTTAGAAAACATCTCCTAGTAATTCCTAA79990.13424571413131242No Hit
AAGTGCGTGCAGATTCAAGCTTTAGTTAGTAAAATGCTTTTCAGTAAAAT79980.13422893131919447No Hit
AAGTGCGTGCAGATTCAAGCTTTGATCCTTGGTGATTGAGAAGATAGTGA79820.13396040632530762No Hit
AAGTGCGTGCAGATTCAAGCTTGCGAGAACCTCGCACAGGGTTGGTATTT79250.13300378603458568No Hit
AAGTGCGTGCAGATTCAAGCTTTGCTCCAGAGATTAAATTACCAACAGGG78740.1321478626165713No Hit
AAGTGCGTGCAGATTCAAGCTTTATATCAGTGTCATGTCAATAAACGCAT78490.1317282923136231No Hit
AAGTGCGTGCAGATTCAAGCTTCCCTTTTAGGGCAAAGCGTGGCGGATCA77960.13083880327137287No Hit
AAGTGCGTGCAGATTCAAGCTTCCATTTCTTTCATTTTTACTAAGACAAC76650.1286402548839242No Hit
AAGTGCGTGCAGATTCAAGCTTCATCCAATACCAAGTTTTAGCACAAGTC75350.12645848930859344No Hit
AAGTGCGTGCAGATTCAAGCTTGGTCACAGCATATAACAAGTGTCTAAAC74210.12454524872714957No Hit
AAGTGCGTGCAGATTCAAGCTTCTATGTGGATCCCAGCTAGAGCTCATAC73730.12373967374548898No Hit
AAGTGCGTGCAGATTCAAGCTTTATAGATAAAAGAAGGGAAATGAACTCT73550.12343758312736627No Hit
AAGTGCGTGCAGATTCAAGCTTCTTGGATACCCTCTACACCATCCCAAGT73320.1230515784486539No Hit
AAGTGCGTGCAGATTCAAGCTTGTGGGAGTAGGTGCTTTATCAGATCCCT73190.12283340189112082No Hit
AAGTGCGTGCAGATTCAAGCTTATCCACCAAGATCAAGTTGGCTTCATCC73140.12274948783053119No Hit
AAGTGCGTGCAGATTCAAGCTTAACTAAATTAGGCTTATAGGAAAATGAT73070.1226320081457057No Hit
AAGTGCGTGCAGATTCAAGCTTTGCAAAGGGATTTCGAACTATAATAGGG72010.12085303006120524No Hit
AAGTGCGTGCAGATTCAAGCTTCCAGTCATGTCAATAAACGCATCTTGGT70460.11825169418292628No Hit
AAGTGCGTGCAGATTCAAGCTTGAGCATGTCAATAAACGCATCTTGGTGT70330.1180335176253932No Hit
AAGTGCGTGCAGATTCAAGCTTTTTGATCATGTCAATAAACGCATCTTGG68310.11464338957757159No Hit
AAGTGCGTGCAGATTCAAGCTTTTGAAGGAGAGGACTGGGAATCTAGTTT68050.11420703646250543No Hit
AAGTGCGTGCAGATTCAAGCTTGCAAAATACTTATTAAATTAAAAAACAG67140.1126798005597739No Hit
AAGTGCGTGCAGATTCAAGCTTTCCTTTTATCACCTTTATTTTTTACCTT66780.11207561932352848No Hit
AAGTGCGTGCAGATTCAAGCTTAGGGTATAGGGACGCTAGTTCAGACTAA66330.11132039277822169No Hit
AAGTGCGTGCAGATTCAAGCTTAACTAACCACTGTTCCTGCCGCCAGGTG66260.11120291309339618No Hit
AAGTGCGTGCAGATTCAAGCTTAATAAATTATTAAAGAGCTATGTTACTC65140.10932323813618815No Hit
AAGTGCGTGCAGATTCAAGCTTCATAAGTGAAGGAGAAATAAAATACTTT64260.10784635066981042No Hit
AAGTGCGTGCAGATTCAAGCTTCAACATGTCAATAAACGCATCTTGGTGT63280.1062016350822534No Hit
AAGTGCGTGCAGATTCAAGCTTACCTGTATTCTCAGAGACTGCCTATATA63130.10594989290048447No Hit
AAGTGCGTGCAGATTCAAGCTTTGTCAACAGGAATTACAATGTGATTCAC62500.10489257573705496No Hit
AAGTGCGTGCAGATTCAAGCTTATAACAGCCGTGCTGCCTTAAGGGGTAA62250.10447300543410674No Hit
AAGTGCGTGCAGATTCAAGCTTTGTCCCTAGTAAATGGCTCTGCCTCTGA61710.10356673357973858No Hit
AAGTGCGTGCAGATTCAAGCTTGGCCTATATGTTGAGTTTTATTCCTCCC60660.10180453830735604No Hit
AAGTGCGTGCAGATTCAAGCTTAGGCATGTCAATAAACGCATCTTGGTGT59710.10021017115615283No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)