FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000710065

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710065
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10821186
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCATATGCC609421156.3174036561242No Hit
CCAGGCTAAGTCACAAGCTTCTTTTCCTGCTCTTATTGCATGCTCAGGTA585060.5406616243358168No Hit
CCAGGCTAAGTCACAAGCTTCACAGAGGACACACCGAGGAGGCTGAATCT576200.53247398205705No Hit
CCAGGCTAAGTCACAAGCTTGATCTCCTTTGAAAAGAGCTCAGCTTAAAG571230.5278811398306987No Hit
CCAGGCTAAGTCACAAGCTTTGCCTAAGACAGACACACGCATGCTCAGGT419000.3872033989619992No Hit
CCAGGCTAAGTCACAAGCTTAAGGGGCATAGCTGGACCCCTGCATATATG336460.3109271017058574No Hit
CCAGGCTAAGTCACAAGCTTTATTGAAGTATAATTGATATACAAAGACCT312710.2889794150105173No Hit
CCAGGCTAAGTCACAAGCTTGCATAATTCTAGCCCCAGTGATTCTTCTTT298590.27593093769943516No Hit
CCAGGCTAAGTCACAAGCTTGGTATGGAGGAGGAACAGAAAAAATGCCAG284330.262753084550991No Hit
CCAGGCTAAGTCACAAGCTTCTGATTTGTACGTCAGGGGTGAAGTGCAGG277830.2567463492448979No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGCCTCATCACACCATATGCC268310.2479487923042816No Hit
CCAGGCTAAGTCACAAGCTTGTGAGATTCACCTTTCCTCGCTTTATATCT249320.23039988407924972No Hit
CCAGGCTAAGTCACAAGCTTGCCAGTAGAAATAGTGACTCTCACATACTG243920.2254096732095724No Hit
CCAGGCTAAGTCACAAGCTTTGGAAAAGTGTTTAGGGCCAATCAGTAGAA236840.218866952291551No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCACCACACCATATGCC222100.20524552484358No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACGCCATATGCC221300.20450623434436851No Hit
CCAGGCTAAGTCACAAGCTTCTGTTATAAGGTCTCATCACACCATATGCC220870.2041088657010424No Hit
CCAGGCTAAGTCACAAGCTTGTAAGAAAAAGACAATAAACAATGTTGGCC219860.2031755114457879No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCCCATCACACCATATGCC219720.2030461356084259No Hit
CCAGGCTAAGTCACAAGCTTGAAACCATCATTCTCAGCAAACTAACACAG217790.2012625972790783No Hit
CCAGGCTAAGTCACAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTAC197460.1824753774678672No Hit
CCAGGCTAAGTCACAAGCTTCCCTCCACTTTACTCATCAGCAATGCAGCT196790.1818562216747776No Hit
CCAGGCTAAGTCACAAGCTTTTGCTATAAGGTCTCATCACACCATATGCC195370.18054398103867728No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAGGGTCTCATCACACCATATGCC195150.18034067615139412No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCGCACCATATGCC187080.17288308324059856No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCATACGCC186800.1726243315658746No Hit
CCAGGCTAAGTCACAAGCTTTCGTTATAAGGTCTCATCACACCATATGCC181970.16816086517688542No Hit
CCAGGCTAAGTCACAAGCTTAAGCTATGTGCGCTATAGAAGAGGTAGGGT174240.16101747072825473No Hit
CCAGGCTAAGTCACAAGCTTCTGCTAGAAGCCAGTATCACAAATCTAGAA171790.15875339357441967No Hit
CCAGGCTAAGTCACAAGCTTCCACACATGCTCAGGTAGTCGGTCATCGTA170900.15793093289404692No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCGTCACACCATATGCC170130.1572193657885559No Hit
CCAGGCTAAGTCACAAGCTTAAATGACTTGACGAAGCTCATAGAAGATTA167770.1550384588158821No Hit
CCAGGCTAAGTCACAAGCTTTTTCCTCTAGGTACAGTGTTAGACAGTACA159330.14723894404920126No Hit
CCAGGCTAAGTCACAAGCTTCCCTAAACAGGGCTTGAGCTCTGGAAGGAG157710.14574188078829806No Hit
CCAGGCTAAGTCACAAGCTTTGTTCCAATTATCTACTGCTACATAACAGC148980.13767437321565307No Hit
CCAGGCTAAGTCACAAGCTTTTGTTGTAAGGTCTCATCACACCATATGCC148360.1371014230787642No Hit
CCAGGCTAAGTCACAAGCTTGCTTTTGTATATGTAAGGAACCACACAGAG146090.13500368628725168No Hit
CCAGGCTAAGTCACAAGCTTATTGTACTTAAATCCACAAAAATTAGGTAC143810.13289670836449907No Hit
CCAGGCTAAGTCACAAGCTTTGGATTTGAGTTTGTGTTTCCAAACACACT140020.1293943196244848No Hit
CCAGGCTAAGTCACAAGCTTCATTCATTCACAAGTCCTCTCTGGATCCAT139270.12870123478147405No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCGTATGCC139060.12850717102543105No Hit
CCAGGCTAAGTCACAAGCTTGAAAAATTTCATCTGAAAATGAATGTTTTG137560.12712100133940957No Hit
CCAGGCTAAGTCACAAGCTTAAATCCTTCTTCCAAAGGCACCCAGTAGCT134470.12426549178620533No Hit
CCAGGCTAAGTCACAAGCTTGGCAAAGTGTGACATTTGATTAAGCAGGAT133890.12372950617427703No Hit
CCAGGCTAAGTCACAAGCTTTCCACTGGTAGCCACAGCTGCTACTGCCCT129610.11977430200349574No Hit
CCAGGCTAAGTCACAAGCTTCTTTACCTACAAAAAGAAATCAAGATATTC128910.11912742281668572No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATGAGGTCTCATCACACCATATGCC127470.1177966999181051No Hit
CCAGGCTAAGTCACAAGCTTCCTTTCTCGATGTGAAAAGAACAAACCTAT125070.11557882842047074No Hit
CCAGGCTAAGTCACAAGCTTTGCTGATCCTGACATACTGACATATATGTT124750.11528311222078615No Hit
CCAGGCTAAGTCACAAGCTTGGCTCTGTCATTTACTGGCCTCAAAATGTC123140.1137952900911231No Hit
CCAGGCTAAGTCACAAGCTTTTGTCATAAGGTCTCATCACACCATATGCC119190.11014504325126653No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCATGTGCC119020.10998794402018411No Hit
CCAGGCTAAGTCACAAGCTTTTGTTACAAGGTCTCATCACACCATATGCC118750.10973843347670025No Hit
CCAGGCTAAGTCACAAGCTTTCATTTTAATAAAAGTGTCTCCTATTTTTT118250.1092763769146931No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCACATGCC118140.1091747244710515No Hit
CCAGGCTAAGTCACAAGCTTTTGTTTCCTTTTGGGACTATATCAGAACTA112650.1041013434202129No Hit
CCAGGCTAAGTCACAAGCTTTTATTTATTTATTCTTTTTTTTTAAAGCCG110440.10205905341614126No Hit
CCAGGCTAAGTCACAAGCTTATCAAGAACAAACTAAAAGAAGATTGTAAG110220.1018557485288581No Hit
CCAGGCTAAGTCACAAGCTTCAGAGAGAAGATGACATCAAAATAAGGGCC109980.10163396137909467No Hit
CCAGGCTAAGTCACAAGCTTTTCTGAGAGACAAGATGGTTATTTGTACCA109850.10151382667297282No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)