FastQCFastQC Report
Mon 12 Sep 2022
EGAF00000710066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4630139
Sequences flagged as poor quality0
Sequence length101
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGCATTAGATGAAGCTTAGAAGGGCATTTTCTAACCATTACAAATTG1399483.022544247591703No Hit
CAATGCATTAGATGAAGCTTCTTTTCCTGCTCTTATTGCATGATTCCACT1162332.5103566005253835No Hit
CAATGCATTAGATGAAGCTTTTGTTATAAGGTCTCATCACACCATATGCC607631.3123364114986613No Hit
CAATGCATTAGATGAAGCTTTTGTTTCCTTTTGGGACTATATCAGAACTA420220.9075753449302494No Hit
CAATGCATTAGATGAAGCTTTTTCCTCTAGGTACAAGGAATGAGCCCACT342430.7395674298331No Hit
CAATGCATTAGATGAAGCTTAATTTTTGCTGTCACACTAGATTATTGGAA322970.6975384540291338No Hit
CAATGCATTAGATGAAGCTTGTAATCATTTGGACGACGCCTTCATTTCCC318280.6874091684936456No Hit
CAATGCATTAGATGAAGCTTGTGACTTAGCCTGGGTGAGTCAGGGGTGAT309810.6691159811832863No Hit
CAATGCATTAGATGAAGCTTGTTTGGCCGTTTTAGGGTTTGTTGGAATTT284830.6151651170731591No Hit
CAATGCATTAGATGAAGCTTTGATGAGAGCCTCCTATGTCCTGGGCTCCA267500.5777364351264617No Hit
CAATGCATTAGATGAAGCTTAAAGCCTCTTTTTTGTTCTTTTGTTCCTCT261680.5651666181080093No Hit
CAATGCATTAGATGAAGCTTCTCGAGCAAATTGATCAGTTGATCTTTCAG211950.45776163523384505No Hit
CAATGCATTAGATGAAGCTTGTACAAGGAATGAGCCCACTTTCCCAGCAG178960.3865110745055386No Hit
CAATGCATTAGATGAAGCTTATTCCCTTTTCGGGACCTCTGTTCTGTTTA175850.37979421352145154No Hit
CAATGCATTAGATGAAGCTTAGAATTAGGAGGTCAGGTCTGGTTCAACTG170280.3677643370965753No Hit
CAATGCATTAGATGAAGCTTGAGGAAAAAAGGAGATGTTGTAATTTGCAC151880.32802470940937195No Hit
CAATGCATTAGATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGA150430.3248930539666304No Hit
CAATGCATTAGATGAAGCTTCAATTTCCACATACCTAAAATGGCATCCAA144730.31258240843309454No Hit
CAATGCATTAGATGAAGCTTTTATCTAGAGAAATCCCAATTATGCAGGAT143900.3107898056624218No Hit
CAATGCATTAGATGAAGCTTATTTAAATTACTCAAATTAAGTATATCTTT143590.31012027932638736No Hit
CAATGCATTAGATGAAGCTTTAATTTTGTGTGTTATTTGGAGATGGAAGT138340.2987815268612886No Hit
CAATGCATTAGATGAAGCTTCTTTACCTACAAAAAGAAATCAAGATATTC137630.2972480955755324No Hit
CAATGCATTAGATGAAGCTTTAGATTCACTTTCTCTTATCACATGTTTCA137250.29642738587329664No Hit
CAATGCATTAGATGAAGCTTATGTGCCGTGAGACTGATGACAAATTCCTT135260.29212945874843066No Hit
CAATGCATTAGATGAAGCTTGGTACAAGGAATGAGCCCACTTTCCCAGCA134940.2914383347886532No Hit
CAATGCATTAGATGAAGCTTCTGAATAGGTGGGAATGAGTTGCATTGTAT129900.2805531324221584No Hit
CAATGCATTAGATGAAGCTTTCAGCTACTAACTGTGTGATCTAAGGGAAG129880.2805099371746723No Hit
CAATGCATTAGATGAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTAC128520.2775726603456181No Hit
CAATGCATTAGATGAAGCTTAGGGATGGTCTTCTCTAGAGCTTCCAAACT125390.27081260411404495No Hit
CAATGCATTAGATGAAGCTTTCCATAACCTTCCAGACAAGGTTAGCCTCC123760.2672921914439286No Hit
CAATGCATTAGATGAAGCTTACTGGGATAGCCCAATCTGACTTTTCTTTT123430.2665794698604081No Hit
CAATGCATTAGATGAAGCTTTTGATAAATATTAGCTATGGTCATTATCCT120080.2593442659064879No Hit
CAATGCATTAGATGAAGCTTCCAGTGACTCATTTTAGGCCTTCATTTCAC118340.255586279375198No Hit
CAATGCATTAGATGAAGCTTTTGTTTGGTGCCAGGAACCAGGTGGAGCCC118170.25521911977156625No Hit
CAATGCATTAGATGAAGCTTTATTGAAGTATAATTGATATACAAAGACCT117830.2544848005643027No Hit
CAATGCATTAGATGAAGCTTCTTTTAAATATAGTAAGGAAGAGTTTCTCT114600.2475087680952991No Hit
CAATGCATTAGATGAAGCTTCTCTGTCCTTTGAATCAATACAAGTTTATT113750.24567297007714023No Hit
CAATGCATTAGATGAAGCTTTCATTTTAATAAAAGTGTCTCCTATTTTTT110730.23915048770674058No Hit
CAATGCATTAGATGAAGCTTATTGTACAAGGAATGAGCCCACTTTCCCAG108480.23429102236455535No Hit
CAATGCATTAGATGAAGCTTTGAGCATCTGTAGTTTAAAAAACTTTCCAG106520.23005788811091848No Hit
CAATGCATTAGATGAAGCTTCACCAGGCAGGGTAACTCTCTTGTTAGGGG106290.22956114276482842No Hit
CAATGCATTAGATGAAGCTTAAGGGGCATAGCTGGACCCCTGCATATATG102160.22064132415895074No Hit
CAATGCATTAGATGAAGCTTCCACCTCCCAGCCTCCTTAAACCTCACCTT98350.21241262951285045No Hit
CAATGCATTAGATGAAGCTTCCCAAAGTGATGGCACCTCAAGGGTCAGGA98230.21215345802793392No Hit
CAATGCATTAGATGAAGCTTTGTAACTTGTAAATAACCCAGGCAAATTTC97180.20988570753491417No Hit
CAATGCATTAGATGAAGCTTCCCAGTGTCAACCAGCCTAATTCCCTGAGT95730.2067540520921726No Hit
CAATGCATTAGATGAAGCTTCCTGGATGAGGCACCTAGTGGCGTCCCCTA95700.20668925922094344No Hit
CAATGCATTAGATGAAGCTTCCTTTCTCGATGTGAAAAGAACAAACCTAT95490.20623570912233952No Hit
CAATGCATTAGATGAAGCTTGAGGAGCTCCTCCCCAATGTTTTGATGTTG95070.2053286089251316No Hit
CAATGCATTAGATGAAGCTTCCCTGATACAGCATCAGTGAGAACAACAGA92350.19945405526702328No Hit
CAATGCATTAGATGAAGCTTTTCTGATGACCTCAATGTCTTACTTTATGC92110.1989357122971902No Hit
CAATGCATTAGATGAAGCTTGAGGAGCAAGGAGAGCCAGTCCATGTCTCA91410.19742387863517702No Hit
CAATGCATTAGATGAAGCTTCATTCAATGTAAGGGTACAAGGAATGAGCC89900.1941626374499772No Hit
CAATGCATTAGATGAAGCTTCATACAATGCAGCATGTGTAATACCTCATT89520.19334192774774148No Hit
CAATGCATTAGATGAAGCTTGAAGCATTCCGGCCCCACCACTCTGTGCCC88770.19172210596701308No Hit
CAATGCATTAGATGAAGCTTAAAAACATGAGGTTAAGTGAAAGAGGCTGG87510.18900080537538938No Hit
CAATGCATTAGATGAAGCTTAATATGCACTTGTAACTGTGTCAGGCTCTC86830.1875321669608623No Hit
CAATGCATTAGATGAAGCTTCCCTCCACTTTACTCATCAGCAATGCAGCT86790.1874457764658901No Hit
CAATGCATTAGATGAAGCTTCCACACATGGAGTTTCTCTCTCTCCTTTCT85810.18532920933907168No Hit
CAATGCATTAGATGAAGCTTTGCTGACTACTGCTTTAGGATTTAAAATAG85530.1847244758742664No Hit
CAATGCATTAGATGAAGCTTGAATCTGCACTGACTTCCAGTTTGTGCCTT84120.18167921092649703No Hit
CAATGCATTAGATGAAGCTTATTGTATAATAAAGTGTTGAATGTCTTATG83390.18010258439325472No Hit
CAATGCATTAGATGAAGCTTTAAAATGCATCTGTCACAGGCTAATAAAAG83080.17943305805722032No Hit
CAATGCATTAGATGAAGCTTTGACTTTCACCCTCACCAAGATGTAAGGAG82530.1782451887513528No Hit
CAATGCATTAGATGAAGCTTTGCTATTTAGATTGTTAAATCTTTGGATGT82330.17781323627649193No Hit
CAATGCATTAGATGAAGCTTACAGCCAGAAGAAGAGATGAGAATGTGCAA82270.17768365053403365No Hit
CAATGCATTAGATGAAGCTTTCTTTATACTAATACTGCTTTGTCTTATGC82220.1775756624153184No Hit
CAATGCATTAGATGAAGCTTTTTGATATTGATATCAGTGAGAACTGTTAA81810.17669015984185357No Hit
CAATGCATTAGATGAAGCTTCGGCACAAGGGCCCAACTGGAATTCCACTT81460.17593424301084698No Hit
CAATGCATTAGATGAAGCTTTGATGACTACACCCAGATATTATAAGTAGG80490.17383927350777156No Hit
CAATGCATTAGATGAAGCTTGAAGCAAGAAGGAGAAGAGCGCAATCTATG80390.17362329727034112No Hit
CAATGCATTAGATGAAGCTTGCACGGGTGAATGCCACCAGTTGTGCCGAT79950.17267300182564713No Hit
CAATGCATTAGATGAAGCTTGAAAACCACTTTCCTAGGACATTAGTTCCT79920.172608208954418No Hit
CAATGCATTAGATGAAGCTTTCTTGTCAACAAATAAAATGAATACTATTC79180.17100998479743265No Hit
CAATGCATTAGATGAAGCTTCCTCAATATAATGCTTATCATGATATTAAG78720.17001649410525257No Hit
CAATGCATTAGATGAAGCTTGGACAAGAGCCCCCAACTCTGATCTCAATT78480.16949815113541947No Hit
CAATGCATTAGATGAAGCTTATTGACATAATACATCTATATCACATCCTC76110.16437951430831774No Hit
CAATGCATTAGATGAAGCTTGTAGGGCTGCATGGACCAATATGGTAACCA75250.16252211866641586No Hit
CAATGCATTAGATGAAGCTTGTTGGTGTTTGATAAGGGCTAAGACATGAA75000.1619821780728397No Hit
CAATGCATTAGATGAAGCTTAAGTAGTATAGGAAATGCAGTACAAGGAAT74950.16187418995412448No Hit
CAATGCATTAGATGAAGCTTTTATAAGAACAGTCAGCTAGGCAAACAGGT74910.1617877994591523No Hit
CAATGCATTAGATGAAGCTTAGAATCAGGGTACAAGGAATGAGCCCACTT73830.1594552560949034No Hit
CAATGCATTAGATGAAGCTTACATAGACCGACAAAACTGAAAAAGTACAA73800.15939046322367428No Hit
CAATGCATTAGATGAAGCTTCAATGAAAGTTTCCATAAAAAACACACTCA72640.15688513886948102No Hit
CAATGCATTAGATGAAGCTTACTGATTTGTCCAGGGTCTTGCAGCCAATA71530.154487802634003No Hit
CAATGCATTAGATGAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAG71280.15394786204042687No Hit
CAATGCATTAGATGAAGCTTTGCCTAAGACAGACACACGCATGCACACAC70740.1527815903583024No Hit
CAATGCATTAGATGAAGCTTTGGGTGGGCAACATTATCTGTCTGGAATTT70630.1525440164971289No Hit
CAATGCATTAGATGAAGCTTAAATGACTTGACGAAGCTCATAGAAGATTA69690.15051383986528266No Hit
CAATGCATTAGATGAAGCTTCCAAGGCCCTCCTGGAGGGCCAGGAATCGG68950.1489156157082973No Hit
CAATGCATTAGATGAAGCTTCGGTCTTCTGAAAAATACACGAATATGAGG68780.14854845610466552No Hit
CAATGCATTAGATGAAGCTTCCTAATTTTTAAACTGCAACCCTTCATCCT68740.14846206560969336No Hit
CAATGCATTAGATGAAGCTTCATCCATGTCCCTGCAAAGGACAATGAACT68350.1476197582837146No Hit
CAATGCATTAGATGAAGCTTATTGAACTCTTACAACACCATATCTTTATT68240.14738218442254108No Hit
CAATGCATTAGATGAAGCTTCAACTCACTGTCCTCCTTAAACTTTCCTCT67900.14664786521527756No Hit
CAATGCATTAGATGAAGCTTAATGGAGACCTTTAAAATGCAAAATTTTGA67740.14630230323538884No Hit
CAATGCATTAGATGAAGCTTCTTTTCCTTCATTTCATTTGTTGCCTCCTC67710.1462375103641597No Hit
CAATGCATTAGATGAAGCTTAGTGGAAAAAAACAGCTATCTTATTATGCT67390.14554638640438225No Hit
CAATGCATTAGATGAAGCTTCAGTCGTCTCTCCACAAAACCAGGTTATAT66790.14425052897979954No Hit
CAATGCATTAGATGAAGCTTCTTCCTGGGTTTCTTAGAATATATGTTCTC66740.1441425408610843No Hit
CAATGCATTAGATGAAGCTTTTCTCATCATCTCTCCGGCTTTCTCCCCAA66480.1435810026437651No Hit
CAATGCATTAGATGAAGCTTGAGGCTCTTAATTCCAGCTCCATTGCCCAT66190.14295467155521682No Hit
CAATGCATTAGATGAAGCTTCAAGAGGGAAGATGACTTCTCAAACACCCA65390.1412268616557732No Hit
CAATGCATTAGATGAAGCTTTCCTTTTCATGTTATCTAAGCAATGTAGGT65170.1407517139334262No Hit
CAATGCATTAGATGAAGCTTCCTCTTGTGTTCAATCTGGAGACTTGAGAG64980.14034135908230833No Hit
CAATGCATTAGATGAAGCTTGCAGTTGTAATTGATTCAACAGTAGGAATT64830.14001739472616265No Hit
CAATGCATTAGATGAAGCTTCCAGCCTCTCCTGATCCCAATCTTCCTCTT64640.1396070398750448No Hit
CAATGCATTAGATGAAGCTTCCAATAAGAGACATTTGGAGTCACCAGGCT64170.13859195155912166No Hit
CAATGCATTAGATGAAGCTTAAAGTATTTAATTTATCCAAACCACATGGG64030.13828958482671902No Hit
CAATGCATTAGATGAAGCTTTTAGACAAATGTATTTTGAAAACAACTGAA63280.13666976304599063No Hit
CAATGCATTAGATGAAGCTTTTCAGATTAAAGGAACAACGTCAAGAAAAG62870.13578426047252576No Hit
CAATGCATTAGATGAAGCTTCAACCAACATCTGACCACAATCCAGTGAGA62830.1356978699775536No Hit
CAATGCATTAGATGAAGCTTAATTTACTTCAACAATTATTCAGTGGATTA62300.1345531959191722No Hit
CAATGCATTAGATGAAGCTTGAATAAGTTATCTCCTGGGGTGCCTGTTTT61310.1324150311686107No Hit
CAATGCATTAGATGAAGCTTGGACTCAACCCAAGAGGATTTTAAAGAATT60630.13094639275408362No Hit
CAATGCATTAGATGAAGCTTTGGCTCCGTGCACACTTTTCCTTCCCCATA60600.1308815998828545No Hit
CAATGCATTAGATGAAGCTTGGGAATAATAATGAAAACATAATTGCTCCA60480.13062242839793795No Hit
CAATGCATTAGATGAAGCTTTGCTGATAGTGACCTATTGTCTGGGAGTCG60410.13047124503173663No Hit
CAATGCATTAGATGAAGCTTAGGACCTTGGGCAAGTCATCCAAACTCTTC59330.12813870166748773No Hit
CAATGCATTAGATGAAGCTTAATTGCTAATTAATTAAAAGATGATTGGAT58810.12701562523284937No Hit
CAATGCATTAGATGAAGCTTTTATACCTTCTAGACCAGGAGATTATGGAC58760.12690763711413414No Hit
CAATGCATTAGATGAAGCTTTGTACAAGGAATGAGCCCACTTTCCCAGCA58280.12587095117446798No Hit
CAATGCATTAGATGAAGCTTGGTATGGAGGAGGAACAGAAAAAATGCCAG58030.12533101058089186No Hit
CAATGCATTAGATGAAGCTTTCAGCTCTTGACCACAAATAGGCTCTCCAG57850.12494225335351702No Hit
CAATGCATTAGATGAAGCTTTACAATCTTTTAAATGCTCTTCACTTAGAA57810.12485586285854486No Hit
CAATGCATTAGATGAAGCTTTGGGGTAGTTTGCATCACTGCTGTAGGCAC57400.12397036028507999No Hit
CAATGCATTAGATGAAGCTTGCAACTAAAAGTCTGAGCCTGGCATGTGAT56380.12176740266328938No Hit
CAATGCATTAGATGAAGCTTCCTGTACAAGGAATGAGCCCACTTTCCCAG55440.11973722603144311No Hit
CAATGCATTAGATGAAGCTTTTCCAATTCTACTTTTCTGATTCAGTGCTT54860.1184845638543465No Hit
CAATGCATTAGATGAAGCTTCCTGCCTCAGCCTCCCAAGTAGATGGGAAT54760.11826858761691604No Hit
CAATGCATTAGATGAAGCTTGAAAAATTTCATCTGAAAATGAATGTTTTG54400.1174910731621664No Hit
CAATGCATTAGATGAAGCTTGCATTGGCTCTTTCTTTTTAAAAAGTTATT54370.11742628029093728No Hit
CAATGCATTAGATGAAGCTTTACAGTACAAGGAATGAGCCCACTTTCCCA53670.1159144466289241No Hit
CAATGCATTAGATGAAGCTTACTCTACTGGGACCCAACCCTAGTTAGACC53490.11552568940154928No Hit
CAATGCATTAGATGAAGCTTGTTGGTACAAGGAATGAGCCCACTTTCCCA53030.1145321987093692No Hit
CAATGCATTAGATGAAGCTTCCTTACTCATGAGCTAAATGGGTTTCAGCA52630.11366829375964739No Hit
CAATGCATTAGATGAAGCTTTGTGGGAGGCTTAGAGTACAAGGAATGAGC51960.11222125296886334No Hit
CAATGCATTAGATGAAGCTTCTTCACTGTTTTCTCCAAAAATCTGAGTTG51750.1117677028702594No Hit
CAATGCATTAGATGAAGCTTTTTGATGTGCTGCTGGATTTGGTTTGCCAG51640.1115301290090859No Hit
CAATGCATTAGATGAAGCTTATCATGTGCCAAGTTTTGTGCTATGTCCTT51130.1104286501981906No Hit
CAATGCATTAGATGAAGCTTAATTCTGTTAGAGAACTTTAAGGACGATAT51040.11023427158450318No Hit
CAATGCATTAGATGAAGCTTTACAAGGGGTATCATTTATCTCCCAGCGTC49910.10779374010153908No Hit
CAATGCATTAGATGAAGCTTCATTTCAGCAAATTTTCTCCCATTTGCACC48310.10433812030265183No Hit
CAATGCATTAGATGAAGCTTGGTGAGAGCTAAATATAAGTACAAGGAATG47790.10321504386801347No Hit
CAATGCATTAGATGAAGCTTCTGTCCATTCAGTTCATTCATGCGTTCATT47590.10278309139315257No Hit
CAATGCATTAGATGAAGCTTCGACACATGGCAGAAGGCAAAGGAGGAGGC47080.10168161258225725No Hit
CAATGCATTAGATGAAGCTTGGTTCAGAGAAAAGCCATTCCCTGTCTCAT46900.10129285535488243No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)