FastQCFastQC Report
Sat 10 Sep 2022
EGAF00000710069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1973021
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTCGCAGTGGAAGCTTACCTATTTTTAGGATCATCTGAGGTCAGGAGT44876822.745221667686256No Hit
CTTTCGCAGTGGAAGCTTACAAATTTCTAGGCAAAAAGCACACTTCAGGA305531.5485390170707762No Hit
CTTTCGCAGTGGAAGCTTAATGATACGGCGAAACCTGTCTCTGCTTCGTA302981.5356146741469048No Hit
CTTTCGCAGTGGAAGCTTTTCACATTTTTTATATCAAGAAATAAAGCAAG214481.0870639491419505No Hit
CTTTCGCAGTGGAAGCTTCACAGTCTGGGGAGGTGAAAGGGAAGCAAACC205391.0409924678956788No Hit
CTTTCGCAGTGGAAGCTTTCCTTTTATCACCTTTATTTTTTACCTTCCCT193910.9828075828893864No Hit
CTTTCGCAGTGGAAGCTTACAAGCAGAGAAGGAGCAGAGTGTCCGCAATC134410.6812395813323832No Hit
CTTTCGCAGTGGAAGCTTATCCACCAAGATCATCTGAGGTCAGGAGTTCA102930.5216873008447452No Hit
CTTTCGCAGTGGAAGCTTGTGGCCAAATGTAGACAAATTTTATGCATTAT89050.4513383283806913No Hit
CTTTCGCAGTGGAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTA80760.40932154295367357No Hit
CTTTCGCAGTGGAAGCTTTCACCTCTTGTTAAAGCAGTAAATGGTCTTTG79650.4036956525044589No Hit
CTTTCGCAGTGGAAGCTTCTAGAAATAATAAGTGAGTTTAGCAAGTTAAC63620.3224496850261604No Hit
CTTTCGCAGTGGAAGCTTCAAAAATGCATAGAATTATGTAACCATTTCCA62120.31484713036505946No Hit
CTTTCGCAGTGGAAGCTTGTAATCTCAGCTACTCAGGAGGCTGAGGCAGG60700.3076500452858839No Hit
CTTTCGCAGTGGAAGCTTGTGGGGGTTATATCCTACTGCTCAAGGTCATC60140.30481175821240625No Hit
CTTTCGCAGTGGAAGCTTCAGGAATACAAAGCTAAAAGACAAGGTATCCC54170.2745535906612246No Hit
CTTTCGCAGTGGAAGCTTACCTATTTTTAGGATCATCTTAGGTCAGGAGT49410.25042815053666434No Hit
CTTTCGCAGTGGAAGCTTTCCTTGCTCCAGAGTGAGACACTATCTCCATC47490.24069688057045516No Hit
CTTTCGCAGTGGAAGCTTAGCGTTCCAATAACGGAACACTAGGCATAATG46270.23451346944609305No Hit
CTTTCGCAGTGGAAGCTTTTGTAGATGCCTTAAAGTTTTGTATGTAGACA44640.2262520267143634No Hit
CTTTCGCAGTGGAAGCTTTACAGAACCATCTCCACCCCCACTCCTACCCA43900.2225014330815536No Hit
CTTTCGCAGTGGAAGCTTGTTGTTTGTTTGTTTGATTCAGATGGGGGAAG41660.21114828478764291No Hit
CTTTCGCAGTGGAAGCTTATCCACCATGATCATCTGAGGTCAGGAGTTCA39130.19832530925925268No Hit
CTTTCGCAGTGGAAGCTTGAGGAGCAAGGTAATAAAGTGGCACCTTAAAA38410.19467608302192424No Hit
CTTTCGCAGTGGAAGCTTGCTCCAAATCATAGACACTGGTAGGTTAAACA38360.19442266453322088No Hit
CTTTCGCAGTGGAAGCTTACCTATTTTTAGGATCCATCTGCCTCAGCCTC35420.17952165739746306No Hit
CTTTCGCAGTGGAAGCTTACCTATTTTTAGGATCATCTGAGGCCAGGAGT33810.17136158206121477No Hit
CTTTCGCAGTGGAAGCTTTCTGGAAAATTGATGAATATTTGAAAATTAAT33300.16877671347644044No Hit
CTTTCGCAGTGGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAA32320.16380971109785453No Hit
CTTTCGCAGTGGAAGCTTAACATGTCCACAAACAATCTCTTTTTTCTAGC30490.1545345944113114No Hit
CTTTCGCAGTGGAAGCTTGTAATAAAATTTGCAGGTGTGGCTGGTTTATA29230.1481484484959866No Hit
CTTTCGCAGTGGAAGCTTACCTATTTTTAGGATCATCTGAGGTCAGGAGC26000.1317776141257493No Hit
CTTTCGCAGTGGAAGCTTTGCCTTCTTGGACTCTGGCCCCTCCTTAAAGG25470.12909137814549365No Hit
CTTTCGCAGTGGAAGCTTACCTATTTTTAGGATCACCTGAGGTCAGGAGT24330.12331343660305695No Hit
CTTTCGCAGTGGAAGCTTAAATCTTATCACTCATTTGGCACATAGCATAT23890.12108335390246733No Hit
CTTTCGCAGTGGAAGCTTAGTTTGGCTGGATATGAAATTCTGGTTTGAAA23370.11844780161995233No Hit
CTTTCGCAGTGGAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAG23210.11763686245610158No Hit
CTTTCGCAGTGGAAGCTTTTGCTGACACTTAATGAAATCTTTTTAATTAC23150.11733276026965754No Hit
CTTTCGCAGTGGAAGCTTACCTATTTTTAGGATCATCTGGGGTCAGGAGT21630.10962883821307527No Hit
CTTTCGCAGTGGAAGCTTATGATACGGCGAAACCTGTCTCTGCTTCGTAT21520.10907131753792787No Hit
CTTTCGCAGTGGAAGCTTGAGATTCCTTTTAGATATCAAAGAAAAGATGG20820.10552345869608078No Hit
CTTTCGCAGTGGAAGCTTTTGAAATGGTTTCAGCTCTGTTCAATTGGGCA20740.1051179891141554No Hit
CTTTCGCAGTGGAAGCTTGCATTAGGTTCCGTATTTTAAGATATTTTGAG20120.1019755998542337No Hit
CTTTCGCAGTGGAAGCTTGCGAGAACCTCGCACAGGGTTGGTATTTAGTA19750.10010030303782878No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)