FastQCFastQC Report
Tue 14 Feb 2023
EGAF00000710375

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710375
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74321190
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT993750.13371018413456512No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA796320.1071457547975214No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT762610.10261003624941957No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)