FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000710376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5724553
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCTCTGGCTA116360020.326477892684373No Hit
GACTGTATTACCAAGCTTCCCTCTGGTTTGTAGCTCAACATTAATGAGTT1162382.0305166185027894No Hit
GACTGTATTACCAAGCTTCTTTCTCAAAACAGGGCTCAGGCCTAGAAAAA785681.3724739730770246No Hit
GACTGTATTACCAAGCTTCTTGTAGAAAAGATCTCTGGCTATCCTTGCCA584191.020498893101348No Hit
GACTGTATTACCAAGCTTCATGCAAATGTGAACTTGAACTCTGCTCTTAG244230.4266359312246738No Hit
GACTGTATTACCAAGCTTAATCCATGTAAAGCTATTATTATTGTGCTGCT217580.380082078024258No Hit
GACTGTATTACCAAGCTTTGTGCTGTGTTAAAACCAGGAAGGTATCTACG203310.35515436751131485No Hit
GACTGTATTACCAAGCTTTCCCACCTACCTACCCAGAGCAGAAGGAAGGT203190.3549447441573167No Hit
GACTGTATTACCAAGCTTACCTGGGACAGTCCTAGTGAAGCCACCACTTT193460.33794778387063584No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCAGTGATTA187870.3281828292968901No Hit
GACTGTATTACCAAGCTTTCAGTCCCATGTTAGACAGTGTGATTAGAGGA186260.32537038263074863No Hit
GACTGTATTACCAAGCTTACAATGAAGTTTTGTGTTGAGTTATAACATTC185880.32470657534308794No Hit
GACTGTATTACCAAGCTTGAATATTGAACTTAGGTGGGAGGTATTATTCC165630.28933263435590517No Hit
GACTGTATTACCAAGCTTGATGAAGACCAATGCAATATGTTTCACAGCCA158570.27699979369568245No Hit
GACTGTATTACCAAGCTTTCTCTGTAGCACCCCCACTCTTCCTACACACT149330.2608587954378272No Hit
GACTGTATTACCAAGCTTCTCTCTGCCTTCTGGGCTTCAAGGCCAGGCCT147890.25834331518984976No Hit
GACTGTATTACCAAGCTTTGGCAAGATTTGGTATCTGTAGCAGACTCCAG146850.25652657945519936No Hit
GACTGTATTACCAAGCTTCCTGTTATCAGTGGGTGGGCACTCGCAAAGAG145290.2538014758532238No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTTATCTCTGGCTA143410.2505173766405866No Hit
GACTGTATTACCAAGCTTTCTCACCATTAATCCTGTGGTCTGAGGGCCTT142640.249172293452432No Hit
GACTGTATTACCAAGCTTGACCGTGGCTCCTCATTCTGTGGAGTGACGAT140990.24628997233495786No Hit
GACTGTATTACCAAGCTTTTTCAGGGTTGCATCATTTGGCCCTATTCACC139500.24368714902281452No Hit
GACTGTATTACCAAGCTTGGGTGTTGGATAACCCATTCAAGACACAGGTG134860.23558171266822056No Hit
GACTGTATTACCAAGCTTTCAGAATGGAACGCAATGAGAGCCAGGTGGCT131060.22894363979161342No Hit
GACTGTATTACCAAGCTTAGGGTAATGTATGGGGTCACCAAGGAGATGAG129810.22676006318746636No Hit
GACTGTATTACCAAGCTTTTTCTATGGTCCGGTGCTGTGCAGATTATCTC129000.225345105547979No Hit
GACTGTATTACCAAGCTTAATATAAGAGAATCTAGATTTACAGAAGAAGA126500.22097795233968487No Hit
GACTGTATTACCAAGCTTTTGGGGCAAAGGCAATATAAATTATGCCCTTG123590.21589458600523043No Hit
GACTGTATTACCAAGCTTACATTCTAGCAGAGAAAAATGAATCAATTATA121670.21254061234126054No Hit
GACTGTATTACCAAGCTTTTGGGTCAAAGGCAATATAAATTATGCCCTTG121510.2122611145359297No Hit
GACTGTATTACCAAGCTTCCTGCAAAACGGGAGGAGCGTATTGATCTCTG117630.20548329275665717No Hit
GACTGTATTACCAAGCTTGGGCAGAGGCAACAGGAAGTGGGAAATGAGTC117030.20443517598666655No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACATTTGAGTGATCTCTGGCTA116190.20296781250867973No Hit
GACTGTATTACCAAGCTTCTGCAGAGTTCTTTTGGGACACTCTCTCTGGG115290.2013956373536938No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTGAGTGATCTCTGTCTA112080.19578821263424412No Hit
GACTGTATTACCAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAA111920.19550871482891327No Hit
GACTGTATTACCAAGCTTCAAGACGATTCCAAAGGAGCCCAACGGCCAAG108110.18885317333947296No Hit
GACTGTATTACCAAGCTTTTCATATTCTCAAATATTCACTGTTTAATCAA106630.18626781864016284No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGTTTAGTGATCTCTGGCTA106460.18597085222199883No Hit
GACTGTATTACCAAGCTTCCTTATCTCCCATCTAAAGCTATCTGTGAACA104550.18263434717086208No Hit
GACTGTATTACCAAGCTTGTTACAAGTGCAGAACCCAACCCTATACAGTC102860.17968215160205522No Hit
GACTGTATTACCAAGCTTAACATCACGCTCTCTCGGTAGAAAGGAGACAT102030.17823225673690155No Hit
GACTGTATTACCAAGCTTTATCATACTAGTAACTGCAGTTATTAAAATTA98550.17215317947095607No Hit
GACTGTATTACCAAGCTTAAACTAGAATTACCATATGATCTCTGGCTATC97360.17007441454380806No Hit
GACTGTATTACCAAGCTTCCTACTGCTCTGAGGTCTTAAGGGATGTTCTG97320.17000454009247534No Hit
GACTGTATTACCAAGCTTTCCTCTAACTTACTTTCCCAAGGCAGAGAGAA95120.16616144526917648No Hit
GACTGTATTACCAAGCTTAAAGTCTCATTGGGCTCCTATGTTCAAAAGGA94770.16555004382001529No Hit
GACTGTATTACCAAGCTTATCCACCATGATCTCTGGCTATCCTTGCCATT93510.16334899860303503No Hit
GACTGTATTACCAAGCTTGTTACAAGTGCAGACCCCAACCCTATACAGTC90200.15756688775525354No Hit
GACTGTATTACCAAGCTTTTAAACTTTTTGGACTTTAACCTACAATAAGA88470.154544817735114No Hit
GACTGTATTACCAAGCTTCGTGTCTCTGCATTCTCGGAATCAGTCACACA85680.1496710747546577No Hit
GACTGTATTACCAAGCTTCATGAGGGTAAGTCCTGTTAGTTTATTTTTTT85410.14919942220816193No Hit
GACTGTATTACCAAGCTTCATTCATTTCATGGGGAGAAATGACATATCTC82810.144657582871536No Hit
GACTGTATTACCAAGCTTCATGAGGGTAAGGCCTGTTAGTTTATTTTTTT81810.14291072158821833No Hit
GACTGTATTACCAAGCTTAAGAAATAAAACAGGTGAGTGATCTCTGGCTA80560.14072714498407124No Hit
GACTGTATTACCAAGCTTTTATTTGTAGACATTTGTGCCTGTTCTTATAA77330.1350847830389552No Hit
GACTGTATTACCAAGCTTCCTGGAAGCCCAGGGGAGAAGGAAAATGGGTT69730.12180863728574091No Hit
GACTGTATTACCAAGCTTCAGGCTTTGAGGGTGAACTACTTGGAGTTACA64350.11241052358149187No Hit
GACTGTATTACCAAGCTTAAGGAATAAAACAGTTGAGTGATCTCTGGCTA63280.11054138200834196No Hit
GACTGTATTACCAAGCTTGGCCATTGACCTCAGAAATCCTCGTATGCCGT62710.1095456710768509No Hit
GACTGTATTACCAAGCTTAGGGGGATCTCTGGCTATCCTTGCCATTGACC62300.10882945795069066No Hit
GACTGTATTACCAAGCTTGTTCCTTACAGATAACTAGAATGTCGATTTTA62050.10839274262986122No Hit
GACTGTATTACCAAGCTTCTTTAAGTAAGTCATGGGCTCACCATCTGGAA61770.10790362147053227No Hit
GACTGTATTACCAAGCTTTCAGATGATACCGTTCCTGCTGGCCCATGGAT61410.10727475140853793No Hit
GACTGTATTACCAAGCTTAGCTTCTGGGGCAGGCAGATCTCTGGCTATCC57580.10058427269343125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)