FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000710380

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710380
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7718755
Sequences flagged as poor quality0
Sequence length101
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAATTAC198650125.736028673017863No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTA2221632.87822323677847No Hit
ACATTTGGCCACAAGCTTTCTGGAAAATTGATGAATATTTGAAAATTAAT891071.1544219242611018No Hit
ACATTTGGCCACAAGCTTATAGGTTGGAAGTGAGTGGTTTGACATAGTTA583170.7555233972318075No Hit
ACATTTGGCCACAAGCTTACAAATTTCTAGGCAAAAAGCACACTTCAGGA323870.41958839216946253No Hit
ACATTTGGCCACAAGCTTCTAGAAATAATAAGTGAGTTTAGCAAGTTAAC265360.3437860121224213No Hit
ACATTTGGCCACAAGCTTAATGATAATCTAAAGGATGATCTGGTCCTTAC264790.3430475510623151No Hit
ACATTTGGCCACAAGCTTACCTATTTTTAGGATCACTGGACACCTGGCCA250920.32507833193306435No Hit
ACATTTGGCCACAAGCTTATAAACTGTATACCCTAAAGAGTGAATTTTAC233020.3018880635542908No Hit
ACATTTGGCCACAAGCTTACTCTCAATATAAAAGATTCTGGTGCTCTAAG220880.2861601385197483No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTCAGTTTGCCAGTA209330.2711965854597017No Hit
ACATTTGGCCACAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAG191580.2482006489388509No Hit
ACATTTGGCCACAAGCTTTTCCTGACACTTAATGAAATCTTTTTAATTAC171480.22216017997721138No Hit
ACATTTGGCCACAAGCTTTTCACATTTTTTATATCAAGAAATAAAGCAAG130090.16853754264774565No Hit
ACATTTGGCCACAAGCTTTCACCTCTTGTTAAAGCAGTAAATGGTCTTTG120650.15630759105581146No Hit
ACATTTGGCCACAAGCTTTCCTTGCTCCAGAGTGAGACACTATCTCCATC117650.1524209538973578No Hit
ACATTTGGCCACAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAA113170.146616909074067No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTTGGTTTGCCAGTA112720.14603391350029893No Hit
ACATTTGGCCACAAGCTTCAATGCCTGAAACAAACAATATACTTTGGTAG100990.13083716221074512No Hit
ACATTTGGCCACAAGCTTTTTTTGTTTTGTTTTTGTATTGTTTTCTTTCC96820.12543473656049456No Hit
ACATTTGGCCACAAGCTTAACATGTCCACAAACAATCTCTTTTTTCTAGC90480.11722097669896246No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAGATCTTTTTAATTAC88530.11469466254596758No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGGAATCTTTTTAATTAC83860.10864446403597472No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAGTCTTTTTAATTAC82480.10685661094308604No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCCTTTTAATTAC82310.10663636817077365No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)