FastQCFastQC Report
Sun 4 Sep 2022
EGAF00000710382

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710382
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1522407
Sequences flagged as poor quality0
Sequence length101
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTGCGTGCAGATTCAAGCTTTTGAAATGGTTTCAGCTCTGTTCAATTG1462599.607089300036062No Hit
AAGTGCGTGCAGATTCAAGCTTATTGAAGTTTAGGGAAAGAAGGTTGCTG158421.0405890146327492No Hit
AAGTGCGTGCAGATTCAAGCTTCAGTGTGTCCAGAGTTTTTATTGGGGCT97880.6429292561056275No Hit
AAGTGCGTGCAGATTCAAGCTTTTCTGGAATATTATTTAAATTAAAATCT94040.6177060405003393No Hit
AAGTGCGTGCAGATTCAAGCTTAGGGAACACTGTATGTGTAATTCCAATG90700.5957670977603229No Hit
AAGTGCGTGCAGATTCAAGCTTGGATGAACGTCCGTGGTTGGCAGTACTC84710.5564215088343656No Hit
AAGTGCGTGCAGATTCAAGCTTCATGTCAATAAACGCATCTTGGTGTCTG72560.47661367820825834No Hit
AAGTGCGTGCAGATTCAAGCTTGCCAGAAATATATAAACACCTACCCCAG71690.4708990434226853No Hit
AAGTGCGTGCAGATTCAAGCTTAGGTGTCCAATTTGGGGCTGCCTGATTA59880.39332451834496296No Hit
AAGTGCGTGCAGATTCAAGCTTAAATCTTATCACTCATTTGGCACATAGC53050.3484613510053488No Hit
AAGTGCGTGCAGATTCAAGCTTATCCACCATGTCAATAAACGCATCTTGG51560.3386742178668385No Hit
AAGTGCGTGCAGATTCAAGCTTGTGCCACCATGTCAATAAACGCATCTTG42920.28192198275494007No Hit
AAGTGCGTGCAGATTCAAGCTTCTACAGTTACCTTTATTTTGCATGTCAA41260.2710181968422373No Hit
AAGTGCGTGCAGATTCAAGCTTATTTTTGTTAACAAGCAGTCTGTGTGTG40860.2683907785500198No Hit
AAGTGCGTGCAGATTCAAGCTTAGGACAAAGGATTGACAATTGGTTGCAG38550.2532174379124636No Hit
AAGTGCGTGCAGATTCAAGCTTCTTCTGTTCTCTTTAACTCATCTACGTG32650.21446301810225518No Hit
AAGTGCGTGCAGATTCAAGCTTCTCTACTTTTACTTCAAGGCACTCTTAA32450.21314930895614642No Hit
AAGTGCGTGCAGATTCAAGCTTCACAGTCTGGGGAGGTGAAAGGGAAGCA31920.20966797971895818No Hit
AAGTGCGTGCAGATTCAAGCTTAGCGTTCCAATAACGGAACACTAGGCAT31740.20848564148746035No Hit
AAGTGCGTGCAGATTCAAGCTTTGTTATTGATTCCAAGTTTAATTCTGTT30360.19942104837930985No Hit
AAGTGCGTGCAGATTCAAGCTTTTTAAAGTAAACTAAATACTTAAATTAT30030.19725342828823042No Hit
AAGTGCGTGCAGATTCAAGCTTTGATCCTTGGTGATTGAGAGGATAGTGA29910.19646520280056515No Hit
AAGTGCGTGCAGATTCAAGCTTCTAGAATAATTTATATGTGATAGAGGAT28550.18753198060702558No Hit
AAGTGCGTGCAGATTCAAGCTTTCACTTCACAACTTAGGCATGTCAATAA28400.186546698747444No Hit
AAGTGCGTGCAGATTCAAGCTTTAATATTTAATACTGCTATCTTTTAGTA27380.17984678210228933No Hit
AAGTGCGTGCAGATTCAAGCTTGCAAAATACTTATTAAATTAAAAAACAG26970.17715367835276638No Hit
AAGTGCGTGCAGATTCAAGCTTATGGAGGCCAGATATGGCAAAGTTGTGT26880.17656250923701744No Hit
AAGTGCGTGCAGATTCAAGCTTTCAGAAGCCTCTAATGAAACATATTTCT26340.1730154945425238No Hit
AAGTGCGTGCAGATTCAAGCTTAGTCCTCCGTTATACTAGTGGGAACAAT22390.14706973890687577No Hit
AAGTGCGTGCAGATTCAAGCTTAAGCCATGTCAATAAACGCATCTTGGTG21800.14319429692585492No Hit
AAGTGCGTGCAGATTCAAGCTTACAAGCAGAGAAGGAGCAGAGTGTCCGC21620.142011958694357No Hit
AAGTGCGTGCAGATTCAAGCTTATCCACCAAGATCAAGTTGGCTTCATCC21330.14010708043249934No Hit
AAGTGCGTGCAGATTCAAGCTTTTAAGCATGTCAATAAACGCATCTTGGT21290.13984433860327758No Hit
AAGTGCGTGCAGATTCAAGCTTCTATGTGGATCCCAGCTAGAGCTCATAC21120.13872768582908512No Hit
AAGTGCGTGCAGATTCAAGCTTTCCTTTTATCACCTTTATTTTTTACCTT20750.1362973239087839No Hit
AAGTGCGTGCAGATTCAAGCTTTTTTTTGCCTGTAATGTTTTATTTTAAA20500.13465518747614796No Hit
AAGTGCGTGCAGATTCAAGCTTCTTGGATACCCTCTACACCATCCCAAGT20370.13380127653117727No Hit
AAGTGCGTGCAGATTCAAGCTTGAAAGCAAGGCCTGTACTCCACTTGAAA20350.1336699056165664No Hit
AAGTGCGTGCAGATTCAAGCTTTGATCCTTGGTGATTGAGAAGATAGTGA20260.13307873650081745No Hit
AAGTGCGTGCAGATTCAAGCTTCCACTGCGAAAGCCATCACCACACACGA20020.13150228552548693No Hit
AAGTGCGTGCAGATTCAAGCTTGCGAGAACCTCGCACAGGGTTGGTATTT19580.12861212540404768No Hit
AAGTGCGTGCAGATTCAAGCTTCTAGTGCCTGATGCTCTATTATTAGTTT19340.12703567442871716No Hit
AAGTGCGTGCAGATTCAAGCTTCATAAGTGAAGGAGAAATAAAATACTTT18790.12342297427691806No Hit
AAGTGCGTGCAGATTCAAGCTTGGGTACTCCTGGTCTAGTGCTCTTTCCT18770.12329160336230718No Hit
AAGTGCGTGCAGATTCAAGCTTCCTTGAGTTCTATACCTAACTACTCTTA18360.12059849961278424No Hit
AAGTGCGTGCAGATTCAAGCTTTTTTTGTTTTGTTTTTGTATTGTTTTCT17870.11737991220481776No Hit
AAGTGCGTGCAGATTCAAGCTTGGTCACAGCATATAACAAGTGTCTAAAC17800.1169201140036797No Hit
AAGTGCGTGCAGATTCAAGCTTTCTAGAAGAATACATCCTATTTGAACTT17480.11481817936990568No Hit
AAGTGCGTGCAGATTCAAGCTTTATAGATAAAAGAAGGGAAATGAACTCT17410.11435838116876762No Hit
AAGTGCGTGCAGATTCAAGCTTAGGGTATAGGGACGCTAGTTCAGACTAA17340.11389858296762954No Hit
AAGTGCGTGCAGATTCAAGCTTTATGGGGACTGAGGAATTTCTGGCAACT17290.11357015568110235No Hit
AAGTGCGTGCAGATTCAAGCTTTTATCTTTTATTCAGGGAAGGAATTTAC17150.11265055927882624No Hit
AAGTGCGTGCAGATTCAAGCTTTTGGCACACCAAATTTTGACCACCTTCT16850.11067999555966308No Hit
AAGTGCGTGCAGATTCAAGCTTTTAGAAAACATCTCCTAGTAATTCCTAA16650.10936628641355434No Hit
AAGTGCGTGCAGATTCAAGCTTCATCCAATACCAAGTTTTAGCACAAGTC16260.10680455357864226No Hit
AAGTGCGTGCAGATTCAAGCTTCCTTTTTAGGGCAAAGCGTGGCGGATCA15840.10404576437181386No Hit
AAGTGCGTGCAGATTCAAGCTTTAGAAACCAAGAGCTAAAGTTATTACAA15810.10384870799989754No Hit
AAGTGCGTGCAGATTCAAGCTTTTTTTAATACGTACATCTATCCACATGT15660.10286342614031596No Hit
AAGTGCGTGCAGATTCAAGCTTCTGTCTTTCTGTTGACTAGAGAAAATAG15610.10253499885378876No Hit
AAGTGCGTGCAGATTCAAGCTTATTTTTTAGAAGACACAACATCAATAAA15560.10220657156726157No Hit
AAGTGCGTGCAGATTCAAGCTTATAAACTGTATACCCTAAAGAGTGAATT15290.10043306422001476No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)