FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000710383

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710383
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7848255
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCATATGCC506584764.54743124427023No Hit
CCAGGCTAAGTCACAAGCTTGATCTCCTTTGAAAAGAGCTCAGCTTAAAG369290.4705377182571157No Hit
CCAGGCTAAGTCACAAGCTTCTTTTCCTGCTCTTATTGCATGCTCAGGTA322740.4112251704359759No Hit
CCAGGCTAAGTCACAAGCTTCTGTTATAAGGTCTCATCACACCATATGCC297550.3791288636773397No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGCCTCATCACACCATATGCC231200.29458777779264306No Hit
CCAGGCTAAGTCACAAGCTTCACAGAGGACACACCGAGGAGGCTGAATCT229230.2920776656721781No Hit
CCAGGCTAAGTCACAAGCTTCACAGAGGACACACCAAGGAGGCTGAATCT225940.28788565101414265No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACGCCATATGCC181280.23098128182634228No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCCCATCACACCATATGCC180370.22982178841028994No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCACCACACCATATGCC180050.229414054461788No Hit
CCAGGCTAAGTCACAAGCTTAAGGGGCATAGCTGGACCCCTGCATATATG171280.21823959593565706No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAGGGTCTCATCACACCATATGCC163540.20837753105626666No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCATACGCC158210.2015862124765314No Hit
CCAGGCTAAGTCACAAGCTTGTGAGATTCACCTTTCCTCGCTTTATATCT156880.19989156825307025No Hit
CCAGGCTAAGTCACAAGCTTTTGCTATAAGGTCTCATCACACCATATGCC153840.19601809574230195No Hit
CCAGGCTAAGTCACAAGCTTTGCCTAAGACAGACACACGCATGCTCAGGT153040.19499876087104714No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCGCACCATATGCC151040.19245042369291007No Hit
CCAGGCTAAGTCACAAGCTTTCGTTATAAGGTCTCATCACACCATATGCC147820.1883476008361094No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCGTCACACCATATGCC141800.1806771059299169No Hit
CCAGGCTAAGTCACAAGCTTTATTGAAGTATAATTGATATACAAAGACCT139970.1783453774119215No Hit
CCAGGCTAAGTCACAAGCTTCTGATTTGTACGTCAGGGGTGAAGTGCAGG130910.16680140999496065No Hit
CCAGGCTAAGTCACAAGCTTGGTATGGAGGAGGAACAGAAAAAATGCCAG128670.16394727235544718No Hit
CCAGGCTAAGTCACAAGCTTTTGTTGTAAGGTCTCATCACACCATATGCC121460.15476051682826308No Hit
CCAGGCTAAGTCACAAGCTTGCTTTTGTATATGTAAGGAACCACACAGAG119810.15265813865630004No Hit
CCAGGCTAAGTCACAAGCTTTTGTTTTAAGGTCTCATCACACCATATGCC119780.15261991359862798No Hit
CCAGGCTAAGTCACAAGCTTGGCTCTGTCATTTACTGGCCTCAAAATGTC117560.14979125933089585No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCGTATGCC116780.1487974078314224No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATTAGGTCTCATCACACCATATGCC115390.14702631349261713No Hit
CCAGGCTAAGTCACAAGCTTCATTCAATGTAAGGGTACTAGAAGTTCTAG114810.1462872957109574No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATGAGGTCTCATCACACCATATGCC105600.13455220300563628No Hit
CCAGGCTAAGTCACAAGCTTGCCAGTAGAAATAGTGACTCTCACATACTG104920.13368576836506968No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGGCTCATCACACCATATGCC99740.12708557507369472No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCATGTGCC95980.12229470117879707No Hit
CCAGGCTAAGTCACAAGCTTGTAAGAAAAAGACAATAAACAATGTTGGCC94940.1209695658461658No Hit
CCAGGCTAAGTCACAAGCTTTTGTCATAAGGTCTCATCACACCATATGCC94690.12065102369889866No Hit
CCAGGCTAAGTCACAAGCTTATTGGAAAGCATTTAAGAACGTTAGAGCGT93720.11941508016750221No Hit
CCAGGCTAAGTCACAAGCTTTTGTTATAAGGTCTCATCACACCACATGCC92950.11843397035391943No Hit
CCAGGCTAAGTCACAAGCTTTTGTTACAAGGTCTCATCACACCATATGCC92040.11727447693786709No Hit
CCAGGCTAAGTCACAAGCTTTCATTTTAATAAAAGTGTCTCCTATTTTTT91780.11694319310470926No Hit
CCAGGCTAAGTCACAAGCTTGAAAAATTTCATCTGAAAATGAATGTTTTG91610.11672658444456761No Hit
CCAGGCTAAGTCACAAGCTTTGAGCATCTGTAGTTTAAAAAACTTTCCAG91130.11611498352181472No Hit
CCAGGCTAAGTCACAAGCTTTGGATTTGAGTTTGTGTTTCCAAACACACT90850.11575821631687552No Hit
CCAGGCTAAGTCACAAGCTTTTTCCTCTAGGTACAGTGTTAGACAGTACA88980.11337552105531738No Hit
CCAGGCTAAGTCACAAGCTTCCCTAAACAGGGCTTGAGCTCTGGAAGGAG87770.11183377706254448No Hit
CCAGGCTAAGTCACAAGCTTGAAACCATCATTCTCAGCAAACTAACACAG85080.10840626355795013No Hit
CCAGGCTAAGTCACAAGCTTCATTCATTCACAAGTCCTCTCTGGATCCAT83690.1066351692191449No Hit
CCAGGCTAAGTCACAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTAC80530.10260879647768836No Hit
CCAGGCTAAGTCACAAGCTTATTGTACTTAAATCCACAAAAATTAGGTAC78700.10027706795969296No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)