FastQCFastQC Report
Mon 12 Sep 2022
EGAF00000710384

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710384
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3951043
Sequences flagged as poor quality0
Sequence length101
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGCATTAGATGAAGCTTGTGACTTAGCCTGGGTGAGTCAGGGGTGAT351840.8904990403799705No Hit
CAATGCATTAGATGAAGCTTCTTTTCCTGCTCTTATTGCATGATTCCACT280670.7103693885386719No Hit
CAATGCATTAGATGAAGCTTTTGTTATAAGGTCTCATCACACCATATGCC273790.692956264965985No Hit
CAATGCATTAGATGAAGCTTAGAAGGGCATTTTCTAACCATTACAAATTG175540.444287748829866No Hit
CAATGCATTAGATGAAGCTTGTACAAGGAATGAGCCCACTTTCCCAGCAG156830.3969331642303058No Hit
CAATGCATTAGATGAAGCTTGGTACAAGGAATGAGCCCACTTTCCCAGCA146390.37050976159965865No Hit
CAATGCATTAGATGAAGCTTGTTTGGCCGTTTTAGGGTTTGTTGGAATTT139920.3541343387049951No Hit
CAATGCATTAGATGAAGCTTACTTTAACCCTTAAAGAATGAGCTTTAAAA139620.35337504552595356No Hit
CAATGCATTAGATGAAGCTTTTATCTAGAGAAATCCCAATTATGCAGGAT135500.3429474192004491No Hit
CAATGCATTAGATGAAGCTTCACCAGGCAGGGTAACTCTCTTGTTAGGGG132960.33651873695123036No Hit
CAATGCATTAGATGAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTAC128070.3241422581328525No Hit
CAATGCATTAGATGAAGCTTAATTTACTTCAACAATTATTCAGTGGATTA125030.31644808725189777No Hit
CAATGCATTAGATGAAGCTTATTTAAATTACTCAAATTAAGTATATCTTT120890.30596984138112393No Hit
CAATGCATTAGATGAAGCTTGGACAAGAGCCCCCAACTCTGATCTCAATT119020.3012369138984314No Hit
CAATGCATTAGATGAAGCTTATTCCCTTTTCGGGACCTCTGTTCTGTTTA115270.29174574916041157No Hit
CAATGCATTAGATGAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAG113740.2878733539472995No Hit
CAATGCATTAGATGAAGCTTTAGACCCAGGCAACTCTAAATATGACGCAC112800.28549423531963586No Hit
CAATGCATTAGATGAAGCTTCTTTACCTACAAAAAGAAATCAAGATATTC111670.28263423101191254No Hit
CAATGCATTAGATGAAGCTTAATTTTTGCTGTCACACTAGATTATTGGAA109700.2776482058028728No Hit
CAATGCATTAGATGAAGCTTTTGATAAATATTAGCTATGGTCATTATCCT109670.2775722764849687No Hit
CAATGCATTAGATGAAGCTTTTTCCTCTAGGTACAAGGAATGAGCCCACT105670.26744836743108086No Hit
CAATGCATTAGATGAAGCTTCTGAATAGGTGGGAATGAGTTGCATTGTAT102960.2605894190470719No Hit
CAATGCATTAGATGAAGCTTAATTGCTAATTAATTAAAAGATGATTGGAT100430.2541860465704878No Hit
CAATGCATTAGATGAAGCTTTGGGTGGGCAACATTATCTGTCTGGAATTT98890.25028834158474106No Hit
CAATGCATTAGATGAAGCTTAAAGCCTCTTTTTTGTTCTTTTGTTCCTCT98850.2501871024942022No Hit
CAATGCATTAGATGAAGCTTCCTAATTTTTAAACTGCAACCCTTCATCCT98760.2499593145404897No Hit
CAATGCATTAGATGAAGCTTCCCAAAGTGATGGCACCTCAAGGGTCAGGA96390.24396089842606117No Hit
CAATGCATTAGATGAAGCTTCAAGAGGGAAGATGACTTCTCAAACACCCA95740.2423157632048044No Hit
CAATGCATTAGATGAAGCTTTGAGCATCTGTAGTTTAAAAAACTTTCCAG95700.24221452411426556No Hit
CAATGCATTAGATGAAGCTTCATACAATGCAGCATGTGTAATACCTCATT94770.23986071525923658No Hit
CAATGCATTAGATGAAGCTTGAATAAGTTATCTCCTGGGGTGCCTGTTTT93830.23748159663157298No Hit
CAATGCATTAGATGAAGCTTAAGGGGCATAGCTGGACCCCTGCATATATG93150.23576053209241207No Hit
CAATGCATTAGATGAAGCTTCCTGTACAAGGAATGAGCCCACTTTCCCAG91490.23155910983504863No Hit
CAATGCATTAGATGAAGCTTAATGGAGACCTTTAAAATGCAAAATTTTGA90520.22910406188948085No Hit
CAATGCATTAGATGAAGCTTTATTGAAGTATAATTGATATACAAAGACCT90130.2281169807567268No Hit
CAATGCATTAGATGAAGCTTACTGGGATAGCCCAATCTGACTTTTCTTTT89590.2267502530344519No Hit
CAATGCATTAGATGAAGCTTGTAATCATTTGGACGACGCCTTCATTTCCC88950.22513042758582988No Hit
CAATGCATTAGATGAAGCTTTAATTTTGTGTGTTATTTGGAGATGGAAGT88640.22434582463415356No Hit
CAATGCATTAGATGAAGCTTTGACTTTCACCCTCACCAAGATGTAAGGAG88540.22409272690780638No Hit
CAATGCATTAGATGAAGCTTTGATGACTACACCCAGATATTATAAGTAGG87080.22039750010313733No Hit
CAATGCATTAGATGAAGCTTAGATTCAAAGGTGAAATGATTCATCTCCAT86230.21824616942918615No Hit
CAATGCATTAGATGAAGCTTATTGTATAATAAAGTGTTGAATGTCTTATG86030.21773997397649178No Hit
CAATGCATTAGATGAAGCTTCCACCTCCCAGCCTCCTTAAACCTCACCTT86020.21771466420385707No Hit
CAATGCATTAGATGAAGCTTTTCCAATTCTACTTTTCTGATTCAGTGCTT85930.21748687625014457No Hit
CAATGCATTAGATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGA85380.21609483875523502No Hit
CAATGCATTAGATGAAGCTTACATAGACCGACAAAACTGAAAAAGTACAA82520.20885624378170525No Hit
CAATGCATTAGATGAAGCTTCTTCCTGGGTTTCTTAGAATATATGTTCTC79990.2024528713051212No Hit
CAATGCATTAGATGAAGCTTTAGATTCACTTTCTCTTATCACATGTTTCA78780.19939038881632015No Hit
CAATGCATTAGATGAAGCTTCAATTTCCACATACCTAAAATGGCATCCAA78150.1977958731403328No Hit
CAATGCATTAGATGAAGCTTCATTCAATGTAAGGGTACAAGGAATGAGCC77180.19534082519476503No Hit
CAATGCATTAGATGAAGCTTACAGCCAGAAGAAGAGATGAGAATGTGCAA76350.1932401140660833No Hit
CAATGCATTAGATGAAGCTTACTCTACTGGGACCCAACCCTAGTTAGACC74920.18962081657931842No Hit
CAATGCATTAGATGAAGCTTTCAGCTACTAACTGTGTGATCTAAGGGAAG74660.18896276249081573No Hit
CAATGCATTAGATGAAGCTTCCAAGGCCCTCCTGGAGGGCCAGGAATCGG73690.18650771454524792No Hit
CAATGCATTAGATGAAGCTTCCTTTCTCGATGTGAAAAGAACAAACCTAT72060.18238222160578865No Hit
CAATGCATTAGATGAAGCTTGAGGAGCTCCTCCCCAATGTTTTGATGTTG71550.18109142320141797No Hit
CAATGCATTAGATGAAGCTTTGGCTCCGTGCACACTTTTCCTTCCCCATA70820.17924380979908344No Hit
CAATGCATTAGATGAAGCTTGCACGGGTGAATGCCACCAGTTGTGCCGAT69760.17656097389980316No Hit
CAATGCATTAGATGAAGCTTGAGGAAAAAAGGAGATGTTGTAATTTGCAC69230.17521955595016303No Hit
CAATGCATTAGATGAAGCTTTAAAATGCATCTGTCACAGGCTAATAAAAG68590.17359973050154098No Hit
CAATGCATTAGATGAAGCTTCCCTGATACAGCATCAGTGAGAACAACAGA67940.1719545952802842No Hit
CAATGCATTAGATGAAGCTTGTAGGGCTGCATGGACCAATATGGTAACCA67170.17000574278741082No Hit
CAATGCATTAGATGAAGCTTATTGAACTCTTACAACACCATATCTTTATT66470.16823405870298047No Hit
CAATGCATTAGATGAAGCTTGAAGCATTCCGGCCCCACCACTCTGTGCCC65650.16615865734693347No Hit
CAATGCATTAGATGAAGCTTTTCAGATTAAAGGAACAACGTCAAGAAAAG64070.16215971327064777No Hit
CAATGCATTAGATGAAGCTTTCCATAACCTTCCAGACAAGGTTAGCCTCC63750.16134980054633674No Hit
CAATGCATTAGATGAAGCTTATTGTACAAGGAATGAGCCCACTTTCCCAG63350.16033740964094798No Hit
CAATGCATTAGATGAAGCTTTTTGATGTGCTGCTGGATTCGTTTTGCCAG63340.16031209986831324No Hit
CAATGCATTAGATGAAGCTTGTTTTGTGGGACAGGAAGATAAAGAAGAGG62940.15929970896292447No Hit
CAATGCATTAGATGAAGCTTGAATCTGCACTGACTTCCAGTTTGTGCCTT62660.15859103532915234No Hit
CAATGCATTAGATGAAGCTTTTCTCATCATCTCTCCGGCTTTCTCCCCAA61700.15616129715621926No Hit
CAATGCATTAGATGAAGCTTTTGTTTCCTTTTGGGACTATATCAGAACTA61270.15507297693292632No Hit
CAATGCATTAGATGAAGCTTTGTTAGGAGAGTACAAGGAATGAGCCCACT60990.15436430329915418No Hit
CAATGCATTAGATGAAGCTTCTTTTAAATATAGTAAGGAAGAGTTTCTCT60830.15395934693699867No Hit
CAATGCATTAGATGAAGCTTGAAAAATTTCATCTGAAAATGAATGTTTTG59090.14955544649855745No Hit
CAATGCATTAGATGAAGCTTAGTGGAAAAAAACAGCTATCTTATTATGCT58990.14930234877221027No Hit
CAATGCATTAGATGAAGCTTTCCCCAACCCTCCATTGCAGACCAAGATCA58600.1483152676394562No Hit
CAATGCATTAGATGAAGCTTGGACTCAACCCAAGAGGATTTTAAAGAATT58160.14720163764352856No Hit
CAATGCATTAGATGAAGCTTATTGACATAATACATCTATATCACATCCTC58060.14694853991718138No Hit
CAATGCATTAGATGAAGCTTCAGTCGTCTCTCCACAAAACCAGGTTATAT57860.14644234446448698No Hit
CAATGCATTAGATGAAGCTTCCTGGATGAGGCACCTAGTGGCGTCCCCTA57750.14616393696550506No Hit
CAATGCATTAGATGAAGCTTCAACTCACTGTCCTCCTTAAACTTTCCTCT56890.14398729651891917No Hit
CAATGCATTAGATGAAGCTTTAATGTGCCTGCTAAGGTACAAGGAATGAG56510.14302552515879982No Hit
CAATGCATTAGATGAAGCTTTTTGATATTGATATCAGTGAGAACTGTTAA55810.14125384107436947No Hit
CAATGCATTAGATGAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTAC54310.13745737517916157No Hit
CAATGCATTAGATGAAGCTTAGGGATGGTCTTCTCTAGAGCTTCCAAACT54280.1373814458612574No Hit
CAATGCATTAGATGAAGCTTTGCTGACTACTGCTTTAGGATTTAAAATAG54140.13702710904437132No Hit
CAATGCATTAGATGAAGCTTCTTTTCCTTCATTTCATTTGTTGCCTCCTC52930.13396462655557026No Hit
CAATGCATTAGATGAAGCTTTTATACCTTCTAGACCAGGAGATTATGGAC52210.13214232292587047No Hit
CAATGCATTAGATGAAGCTTCCAATAAGAGACATTTGGAGTCACCAGGCT52080.1318132958816191No Hit
CAATGCATTAGATGAAGCTTGGGCTGGTTGCAGTGGCTCATGCCTGTAAT51000.12907984043706938No Hit
CAATGCATTAGATGAAGCTTTGGGACCATATAGAACACACCTAGTACAAG50560.12796621044114173No Hit
CAATGCATTAGATGAAGCTTTGCTATTTAGATTGTTAAATCTTTGGATGT50290.12728284658000433No Hit
CAATGCATTAGATGAAGCTTTTCTGAGAGACAAGATGGTTATTTGTACAA50160.12695381953575297No Hit
CAATGCATTAGATGAAGCTTAGAATTAGGAGGTCAGGTCTGGTTCAACTG49400.1250302768155143No Hit
CAATGCATTAGATGAAGCTTGGTATGGAGGAGGAACAGAAAAAATGCCAG49320.12482779863443652No Hit
CAATGCATTAGATGAAGCTTTCTTGTCAACAAATAAAATGAATACTATTC49250.12465063022599349No Hit
CAATGCATTAGATGAAGCTTTATGGAGTCAGTAACCAGTCTCTCTTACTC48980.12396726636485607No Hit
CAATGCATTAGATGAAGCTTCAACCAACATCTGACCACAATCCAGTGAGA48780.12346107091216169No Hit
CAATGCATTAGATGAAGCTTTACAAGGGGTATCATTTATCTCCCAGCGTC48670.12318266341317975No Hit
CAATGCATTAGATGAAGCTTCTCTGTCACAAATCACATTTTCCAACCCGG48410.12252460932467704No Hit
CAATGCATTAGATGAAGCTTATGTGCCGTGAGACTGATGACAAATTCCTT46330.11726017661665539No Hit
CAATGCATTAGATGAAGCTTCAATGAAAGTTTCCATAAAAAACACACTCA45810.11594406843964998No Hit
CAATGCATTAGATGAAGCTTCTGTCCATTCAGTTCATTCATGCGTTCATT45450.11503291662480009No Hit
CAATGCATTAGATGAAGCTTCCAGCCTCTCCTGATCCCAATCTTCCTCTT44950.11376742799306411No Hit
CAATGCATTAGATGAAGCTTTACAATCTTTTAAATGCTCTTCACTTAGAA44740.11323592276773499No Hit
CAATGCATTAGATGAAGCTTCCACACATGGAGTTTCTCTCTCTCCTTTCT44610.11290689572348366No Hit
CAATGCATTAGATGAAGCTTCATCCATGTCCCTGCAAAGGACAATGAACT44560.11278034686031005No Hit
CAATGCATTAGATGAAGCTTTTTGATGTGCTGCTGGATTCAGTTTGCCAG44470.11255255890659757No Hit
CAATGCATTAGATGAAGCTTTCATTTTAATAAAAGTGTCTCCTATTTTTT44300.11212229277180734No Hit
CAATGCATTAGATGAAGCTTTGCCTAAGACAGACACACGCATGCACACAC44250.11199574390863373No Hit
CAATGCATTAGATGAAGCTTCGGTCTTCTGAAAAATACACGAATATGAGG44040.11146423868330464No Hit
CAATGCATTAGATGAAGCTTGGTTCAGAGAAAAGCCATTCCCTGTCTCAT43950.11123645072959217No Hit
CAATGCATTAGATGAAGCTTGGGAATAATAATGAAAACATAATTGCTCCA42820.10837644642186885No Hit
CAATGCATTAGATGAAGCTTTGTAACTTGTAAATAACCCAGGCAAATTTC42400.10731343597121064No Hit
CAATGCATTAGATGAAGCTTGTAAGCGGGTAAATTTGCTTCATTCTCTGT42240.10690847960905513No Hit
CAATGCATTAGATGAAGCTTAATTCTGTTAGAGAACTTTAAGGACGATAT41700.10554175188678028No Hit
CAATGCATTAGATGAAGCTTAAAGTATTTAATTTATCCAAACCACATGGG41630.10536458347833724No Hit
CAATGCATTAGATGAAGCTTTCTTTATACTAATACTGCTTTGTCTTATGC41600.10528865416043309No Hit
CAATGCATTAGATGAAGCTTTACAGTACAAGGAATGAGCCCACTTTCCCA41410.1048077684803734No Hit
CAATGCATTAGATGAAGCTTCTTCACTGTTTTCTCCAAAAATCTGAGTTG41180.10422564370977487No Hit
CAATGCATTAGATGAAGCTTGTATTTTCTATATTTCCAGCTCCTAGGACT40720.10306139416857776No Hit
CAATGCATTAGATGAAGCTTGAGGAGCAAGGAGAGCCAGTCCATGTCTCA39890.10096068303989604No Hit
CAATGCATTAGATGAAGCTTTCCAAATATCCACTTCCAGATTCTATAAAA39730.10055572667774053No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)