FastQCFastQC Report
Mon 5 Sep 2022
EGAF00000710385

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710385
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1735073
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGAGTGTCCCAAAGTTA90023651.88461811116881No Hit
TTGTCAGGGAGTTAAGCTTGATTAGGTTAGGTATTTTTAAAGAAAACTCA218871.261445483849959No Hit
TTGTCAGGGAGTTAAGCTTCAGAACACCTTGGAATACAGTTTAGCTTCCT210251.2117645770523777No Hit
TTGTCAGGGAGTTAAGCTTTTATCACAATGAAAGAAATACTCAAAGCATG133730.7707456689142186No Hit
TTGTCAGGGAGTTAAGCTTTCTTAGCACAGAAGGAGTAAACTGCAAATGA128840.7425624166821799No Hit
TTGTCAGGGAGTTAAGCTTGTTTTCAGCCAGTGTAAGCGTGGTGTTCTTG109820.6329416687367044No Hit
TTGTCAGGGAGTTAAGCTTTCCTAGGGTGCTACACAGATATATAAAGCTG102430.5903498008441144No Hit
TTGTCAGGGAGTTAAGCTTGAGCTCCACCGAAACCAGCACGGAATTTCTA100660.5801485009564439No Hit
TTGTCAGGGAGTTAAGCTTGCAAAAGGAGATCATAAGACAATTATTGGAT86020.49577164764825454No Hit
TTGTCAGGGAGTTAAGCTTGTAAAGAATTTTGTGAGCTGAAGTATTTTAA80300.4628047350169129No Hit
TTGTCAGGGAGTTAAGCTTATTTTAAAAAACGGATTATTGAAACCCAGAA74420.42891567098329575No Hit
TTGTCAGGGAGTTAAGCTTGTCTATGAACTGAAGGAAGAAAGATGGGACC61420.35399086954842823No Hit
TTGTCAGGGAGTTAAGCTTTGGAGGACAAGATGTGCTGATCATTATCTTA53400.3077680305093792No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGGGAGTGTCCCAAAGTTA45520.26235207394732096No Hit
TTGTCAGGGAGTTAAGCTTTTTTTATTTAAAAAAACCCAATAACTCAGTT44890.258721102800862No Hit
TTGTCAGGGAGTTAAGCTTTACCTTTAAAGAGTCCGATGAACTAAAGGCA43770.25226604298493494No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTTAGTTTCCCAAAGTTA43530.250882815881522No Hit
TTGTCAGGGAGTTAAGCTTAAGGATATAGCCATCCACTGTTAATTAACCT42270.24362087358860404No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGGGTGTCCCAAAGTTA40210.23174817428430966No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGAGTGTCCCAAGGTTA37840.21808880663810687No Hit
TTGTCAGGGAGTTAAGCTTTATGATATTGGGCAAGTGAATAACTTCTAGC37040.2134780496267304No Hit
TTGTCAGGGAGTTAAGCTTTGTGGAAAATGGTCTTTCAGCAGCAGCATCT36790.21203718806067526No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGCGAGTGTCCCAAAGTTA36410.20984707848027145No Hit
TTGTCAGGGAGTTAAGCTTATTTTGAGGGTAGCAACATGTCATATGTAAG35110.20235459833678465No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGAGTGCCCCAAAGTTA32500.18731200358716896No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTCTTCTAGGTGAGTGTCCCAAAGTTA32420.1868509278860313No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGAGCGTCCCAAAGTTA30550.1760732833719388No Hit
TTGTCAGGGAGTTAAGCTTCCCGCTTTTCTAGGTGAGTGTCCCAAAGTTA29930.17249994668812205No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTCTCTAGGTGAGTGTCCCAAAGTTA29620.1707132783462137No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTCCTAGGTGAGTGTCCCAAAGTTA29390.16938768570544294No Hit
TTGTCAGGGAGTTAAGCTTAATGCAGAAAATATACCCAAGTCAGGAGGTA28720.16552617670841516No Hit
TTGTCAGGGAGTTAAGCTTCCCGTCTTTCTAGGTGAGTGTCCCAAAGTTA27480.15837950334078163No Hit
TTGTCAGGGAGTTAAGCTTACCTCATTTTGGTTTTGTCAATAAAGGGTCA27390.15786079317700177No Hit
TTGTCAGGGAGTTAAGCTTCCAACTAATGAGAATGAATCTCATCAATGTC26970.15544014574602913No Hit
TTGTCAGGGAGTTAAGCTTTTAACATAGGGAGCCCCTTATTCACCATAAG26890.1549790700448915No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGAGTTTCCCAAAGTTA26670.15371111186676295No Hit
TTGTCAGGGAGTTAAGCTTAATTTTTCCAACAGCCCTGCTCATAAAAGGA26180.15088702319729488No Hit
TTGTCAGGGAGTTAAGCTTATACATAGTAGAGCAAGGAATTGAACCTAAA26000.14984960286973514No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGAGTGTCCCAGAGTTA25760.14846637576632224No Hit
TTGTCAGGGAGTTAAGCTTCTTGCAGCACCTTTTTTTCACTGTCGCATCA25460.14673734188705606No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGAGTGTCCCGAAGTTA24860.1432792741285237No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTGGGTGAGTGTCCCAAAGTTA24720.1424723916515328No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGAGTGTCCCAAAGCTA24570.14160787471189973No Hit
TTGTCAGGGAGTTAAGCTTTGAACCTAAGTTGAACCTTCCAACCCCGGCA23450.13515281489597267No Hit
TTGTCAGGGAGTTAAGCTTCTGCACTTTCAACAAAACTGTAACCAGGGGC22530.12985044433288975No Hit
TTGTCAGGGAGTTAAGCTTACTAAATTTTTCAGTTAATGATGGTGGCATT22440.12933173416910987No Hit
TTGTCAGGGAGTTAAGCTTGGATTATCCAGGAGGGAAACCTGACAATATA21770.1254702251720821No Hit
TTGTCAGGGAGTTAAGCTTTCACTAGAGCAAAGGAAGTCCCTCAACATAA21050.12132054386184328No Hit
TTGTCAGGGAGTTAAGCTTTAATCAGTAATCTTCAAGTAGGAAGTTATTC20650.11901516535615503No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGAGAGTGTCCCAAAGTTA20580.1186117241176596No Hit
TTGTCAGGGAGTTAAGCTTCTGGTGTACTGAATCTTTTCCATTTAACAAA19650.11325171909193446No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGAGTGTCCCAAAGTTG19360.1115803196753105No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGAGTGTCCCAAAGTCA19100.11008182364661313No Hit
TTGTCAGGGAGTTAAGCTTACTAAAGGTCAGAAAATTATCCATTTTACCC18710.10783407960356711No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCCAGGTGAGTGTCCCAAAGTTA18370.10587450787373212No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGTTGAGTGTCCCAAAGTTA17860.1029351502789796No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTTAGTGTCCCAAAGTTA17420.10039923392272256No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)