FastQCFastQC Report
Mon 12 Sep 2022
EGAF00000710386

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710386
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5861535
Sequences flagged as poor quality0
Sequence length101
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAACAGCCACACCAGCAAGCTTATCTCAGATGATTAAATGGCAGCAGATA102415417.472453887932087No Hit
GAACAGCCACACCAGCAAGCTTAATGATACGGCGCCCAGCAAAATGTCGT2939065.0141473180660014No Hit
GAACAGCCACACCAGCAAGCTTGATACGGCGCCCAGCAAAATGTCGTATG1989163.3935820565773303No Hit
GAACAGCCACACCAGCAAGCTTAATGAGACGGCGCCCAGCAAAATGTCGT1410312.4060421033057042No Hit
GAACAGCCACACCAGCAAGCTTATGATACGGCGCCCAGCAAAATGTCGTA1294592.2086194145390246No Hit
GAACAGCCACACCAGCAAGCTTGAGACGGCGCCCAGCAAAATGTCGTATG1132831.9326507476283943No Hit
GAACAGCCACACCAGCAAGCTTATGAGACGGCGCCCAGCAAAATGTCGTA813991.3886976704907503No Hit
GAACAGCCACACCAGCAAGCTTATACGGCGCCCAGCAAAATGTCGTATGC797521.360599228700332No Hit
GAACAGCCACACCAGCAAGCTTGCTTTGAACTCCAAGTACCTCCAAGGTC688101.1739245777769816No Hit
GAACAGCCACACCAGCAAGCTTTGTCATTTTGCTCTTAACAATAAACCTT634631.0827027391289141No Hit
GAACAGCCACACCAGCAAGCTTAGACGGCGCCCAGCAAAATGTCGTATGC551340.9406068546890874No Hit
GAACAGCCACACCAGCAAGCTTCCATGTGATCTGCCTGCCTCAGCCTCCC502340.8570110047965253No Hit
GAACAGCCACACCAGCAAGCTTAGCTCAGTTAACTCAGCACACAGTTCGT470020.8018718646224922No Hit
GAACAGCCACACCAGCAAGCTTCGCTTCTGTGAGCCCCCTTGTCTGTTGG443800.7571395547412069No Hit
GAACAGCCACACCAGCAAGCTTACGGCGCCCAGCAAAATGTCGTATGCCG406490.6934872861801559No Hit
GAACAGCCACACCAGCAAGCTTCTCCCTGGGCAGGCTGTGTTGCTAACAC390090.6655082670324411No Hit
GAACAGCCACACCAGCAAGCTTACTGAATCAAGATCTTGCTTGGTGGGGT284990.4862036992016597No Hit
GAACAGCCACACCAGCAAGCTTTGCCTGGCTGACAAAGGGAGGAGGGGCA278610.4753191783380974No Hit
GAACAGCCACACCAGCAAGCTTCATGTGATCTGCCTGCCTCAGCCTCCCA269290.4594189064809815No Hit
GAACAGCCACACCAGCAAGCTTATGCTTAAAACTATTTAAATTCAAAAGT265240.4525094535816983No Hit
GAACAGCCACACCAGCAAGCTTCAACTACATCCTAATTACCCAGTGGGAA217280.3706878829521618No Hit
GAACAGCCACACCAGCAAGCTTTACGGCGCCCAGCAAAATGTCGTATGCC184900.31544638051295437No Hit
GAACAGCCACACCAGCAAGCTTTAGAGCTGAGCCTTGGAGGAGGGGTGTC182750.3117783993441991No Hit
GAACAGCCACACCAGCAAGCTTATGACATAAAGGCTTTATTTATTTATTT178440.3044253766291594No Hit
GAACAGCCACACCAGCAAGCTTGTCCGCATGTGATCTGCCTGCCTCAGCC175000.29855660675915097No Hit
GAACAGCCACACCAGCAAGCTTTGATACGGCGCCCAGCAAAATGTCGTAT162550.27731643673542855No Hit
GAACAGCCACACCAGCAAGCTTATGAAGTGTTACAAGATAAGGGCAACAG162320.27692404805225934No Hit
GAACAGCCACACCAGCAAGCTTGATTCAAAAATCCAACCACATGTGATCT153270.26148440638842896No Hit
GAACAGCCACACCAGCAAGCTTGGCCAGCCTTGGCTGTTTTCTGATCCCG150340.2564857157724043No Hit
GAACAGCCACACCAGCAAGCTTCTGGAGTGTTTGCCCAGTCTCCGGGGAC142070.2423767835558433No Hit
GAACAGCCACACCAGCAAGCTTGTCTTTTATTTTGTTACACATGTGATCT138890.23695158350159132No Hit
GAACAGCCACACCAGCAAGCTTTTACCTGGTGAATTTAAGAAGACATAAT138820.23683216085888764No Hit
GAACAGCCACACCAGCAAGCTTCGTCCAGGGTTCTTTATTTTTGTCTGCT138110.23562087405432194No Hit
GAACAGCCACACCAGCAAGCTTGTGCAATACATGTGATCTGCCTGCCTCA134080.2287455419100969No Hit
GAACAGCCACACCAGCAAGCTTATCATAGCATCTTAAAGTTGGAAGGGAC132740.2264594513211983No Hit
GAACAGCCACACCAGCAAGCTTCACATGTGATCTGCCTGCCTCAGCCTCC128990.2200618097477879No Hit
GAACAGCCACACCAGCAAGCTTCTTGGCCCCAGGACTGCCCCAGGGGTGG127520.21755393425101102No Hit
GAACAGCCACACCAGCAAGCTTGATCAGGAGAATATTGAAGGGAGACTCG125010.21327177949120837No Hit
GAACAGCCACACCAGCAAGCTTCGCTTCTATAATGATGATGAGCTAGTCT123350.2104397568213787No Hit
GAACAGCCACACCAGCAAGCTTGGTTTCCTCACCTTGAAAGTGGGAATTA122850.20958673794492397No Hit
GAACAGCCACACCAGCAAGCTTTTCTTTAGTAAGACTAATGCTATCAAGG119600.2040421152479683No Hit
GAACAGCCACACCAGCAAGCTTTGTGCTTGGGTTTGGGCACTGCAGCTGT116540.19882163972406547No Hit
GAACAGCCACACCAGCAAGCTTCCCAGAATGGTTGCTGTCTCTGAAGGAT115080.19633082460481766No Hit
GAACAGCCACACCAGCAAGCTTCGTGTCCATTTACAGTCACTTTCCATTG111550.19030851133704738No Hit
GAACAGCCACACCAGCAAGCTTTGTTCTCTTCATCTGGCCTCAGAGTTAG111020.18940431132800536No Hit
GAACAGCCACACCAGCAAGCTTCAGGAAAGAATAGGCTGCACAGGGGCGC107150.18280194522424587No Hit
GAACAGCCACACCAGCAAGCTTTGAGACGGCGCCCAGCAAAATGTCGTAT105060.17923632632066516No Hit
GAACAGCCACACCAGCAAGCTTCCAACCCCCTCCCCTCAGTCTCACACCC104760.17872451499479233No Hit
GAACAGCCACACCAGCAAGCTTTATCCTACTGTAATAGGCTGCTCCAAAG102420.17473238665298424No Hit
GAACAGCCACACCAGCAAGCTTGACCACTTCTAGCCAGGGCCTCGGTGGC101110.17249747719667288No Hit
GAACAGCCACACCAGCAAGCTTTACCCTGGATGGAGAGTGTATCTCATTT98250.1676182092233519No Hit
GAACAGCCACACCAGCAAGCTTCAGTGGCCTGCTCCATCCCCTAATGACT97690.1666628280817226No Hit
GAACAGCCACACCAGCAAGCTTTTCCATTTTTTCTTGCACAAAGCAGCTG97280.16596335260302975No Hit
GAACAGCCACACCAGCAAGCTTAATTAATGCTTACAAAGTGCTCTGAGGC96920.16534917901198234No Hit
GAACAGCCACACCAGCAAGCTTATCCACCATGTGATCTGCCTGCCTCAGC92300.15746728459354076No Hit
GAACAGCCACACCAGCAAGCTTCTGCCCTATTTCTGGCCCCACGTCCCAA91990.15693841289013885No Hit
GAACAGCCACACCAGCAAGCTTCTAGAAAATTCCAACTAAGAAACTGGAG90260.15398696757760552No Hit
GAACAGCCACACCAGCAAGCTTTGGGTATATGACAGGAGGCAGCGTTTGA89250.152263869447167No Hit
GAACAGCCACACCAGCAAGCTTTTCATGTGATCTGCCTGCCTCAGCCTCC89000.15183736000893963No Hit
GAACAGCCACACCAGCAAGCTTATAACAAAAGATATAACAGAGAGTTTAT88070.15025074489873386No Hit
GAACAGCCACACCAGCAAGCTTCCAGGGCCCGACTGCCCAGCACAGCCCA87240.14883473356381904No Hit
GAACAGCCACACCAGCAAGCTTAAACAAGCCCTGAAAGGATCAATCTGAA83600.1426247561432287No Hit
GAACAGCCACACCAGCAAGCTTCTTGACATGTGATCTGCCTGCCTCAGCC83550.14253945425558323No Hit
GAACAGCCACACCAGCAAGCTTGAGAAGGGAGGCTGGTCTTGGGAGAGGC79970.13643183910016743No Hit
GAACAGCCACACCAGCAAGCTTCATAAGTGAAGGAGAAATAAAATACTTT78710.13428223153150157No Hit
GAACAGCCACACCAGCAAGCTTGTACCCACGCTGTGCCACTCAGAAGGAA78380.13371923907304145No Hit
GAACAGCCACACCAGCAAGCTTACATCATTACCAAAGAAAAAAGTAAAAT76420.13037540507733894No Hit
GAACAGCCACACCAGCAAGCTTGACGGCGCCCAGCAAAATGTCGTATGCC74930.1278334088255039No Hit
GAACAGCCACACCAGCAAGCTTAATGATACGGCGACCAGCAAAATGTCGT73830.1259567672973035No Hit
GAACAGCCACACCAGCAAGCTTCAAGATGGTATCTTTAGGATAATTACAT73180.12484784275791239No Hit
GAACAGCCACACCAGCAAGCTTTTCATTCCTGGATCAGAGAGGACTGGCA73150.1247966616253251No Hit
GAACAGCCACACCAGCAAGCTTGCATTCTAGTCCGAGGAGCAGACAGAAT70620.12048038611046424No Hit
GAACAGCCACACCAGCAAGCTTCCCAGTCCCTGGATTGGATTCCCACATT70100.11959324647895134No Hit
GAACAGCCACACCAGCAAGCTTGGCACTATTCCAGACCCCGTGGGGCACT69410.11841608042944382No Hit
GAACAGCCACACCAGCAAGCTTAAGCAATGTGGCCTCCCAAAATGCTGGG66500.11345151056847737No Hit
GAACAGCCACACCAGCAAGCTTCAGTCTCCCAAAGTGCTGGGATTACAGG65950.11251318980437719No Hit
GAACAGCCACACCAGCAAGCTTCCTGAGAGCAGAAAGTTTTGCTACTTTT65510.11176253319309702No Hit
GAACAGCCACACCAGCAAGCTTTGAATCCTGAACTCCCAGCCCCAGCATT64480.11000531430760033No Hit
GAACAGCCACACCAGCAAGCTTGTCTTTATTGATTTTACATTCAGCACAA63860.10894757090079646No Hit
GAACAGCCACACCAGCAAGCTTGGGGCTTATCCCATTTTTGGCTTGGTGA60650.10347118971395719No Hit
GAACAGCCACACCAGCAAGCTTTAACCGCTGTCCCTCATGTGATCTGCCT60300.10287407650043888No Hit
GAACAGCCACACCAGCAAGCTTAGGAGAGGCTTTCTCTGTGAGGGAGGAG60000.10236226517456605No Hit
GAACAGCCACACCAGCAAGCTTCAGGAGGGAATGGAACAGTGAACTGGTT59720.10188457460375142No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)