FastQCFastQC Report
Mon 12 Sep 2022
EGAF00000710442

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710442
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5879391
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAATTAC389086466.17801061368431No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTA606491.0315524175888284No Hit
ACATTTGGCCACAAGCTTTCTGGAAAATTGATGAATATTTGAAAATTAAT331480.5637998901586916No Hit
ACATTTGGCCACAAGCTTTTCCTGACACTTAATGAAATCTTTTTAATTAC188630.320832548813304No Hit
ACATTTGGCCACAAGCTTATAGGTTGGAAGTGAGTGGTTTGACATAGTTA186790.3177029729779836No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAGATCTTTTTAATTAC176880.3008474857344919No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCCTTTTAATTAC167830.285454735022726No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGGAATCTTTTTAATTAC161090.2739909626694329No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAGTCTTTTTAATTAC160560.2730895087603461No Hit
ACATTTGGCCACAAGCTTCCAATTAATATCCACTTTATGAATGTAATTTG151900.25836009205715355No Hit
ACATTTGGCCACAAGCTTTTGCTGGCACTTAATGAAATCTTTTTAATTAC150780.2564551328530455No Hit
ACATTTGGCCACAAGCTTTTGCTGACGCTTAATGAAATCTTTTTAATTAC150520.25601291018066324No Hit
ACATTTGGCCACAAGCTTTTGCCGACACTTAATGAAATCTTTTTAATTAC149200.2537677796901074No Hit
ACATTTGGCCACAAGCTTCTGCTGACACTTAATGAAATCTTTTTAATTAC143810.2446001635203374No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTCTTTAATTAC135370.23024493523223752No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTCTTAATTAC133200.22655407677427816No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAGTGAAATCTTTTTAATTAC130970.22276116693038445No Hit
ACATTTGGCCACAAGCTTTCGCTGACACTTAATGAAATCTTTTTAATTAC125250.21303226813797552No Hit
ACATTTGGCCACAAGCTTTTGCTGACACCTAATGAAATCTTTTTAATTAC122690.20867807567144284No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAACCTTTTTAATTAC121350.20639892805224214No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTGATTAC120410.2048001230059372No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTCTAATTAC118110.2008881532117867No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAGTTAC116660.19842191138503973No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAACGAAATCTTTTTAATTAC114050.19398267609689507No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTCATTAC113060.19229882822897815No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAACTAC111770.1901047234313894No Hit
ACATTTGGCCACAAGCTTTGAACTACTATTGTGAAAAAAATGGTTATAAG110240.18750241309006324No Hit
ACATTTGGCCACAAGCTTTGCTGACACTTAATGAAATCTTTTTAATTACT93260.1586218708706395No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTCAATGAAATCTTTTTAATTAC90210.15343425875230954No Hit
ACATTTGGCCACAAGCTTTTGCTGACATTTAATGAAATCTTTTTAATTAC81830.139181081850144No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAATTGC80390.13673184858771936No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTGATGAAATCTTTTTAATTAC80360.1366808228947522No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAATCAC78270.13312603295137201No Hit
ACATTTGGCCACAAGCTTTTGCTGATACTTAATGAAATCTTTTTAATTAC71200.12110097797543998No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTCAATTAC70920.12062473817441297No Hit
ACATTTGGCCACAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAG70670.12019952406635313No Hit
ACATTTGGCCACAAGCTTCTAGAAATAATAAGTGAGTTTAGCAAGTTAAC69640.11844764194114664No Hit
ACATTTGGCCACAAGCTTAATGATAATCTAAAGGATGATCTGGTCCTTAC68240.11606644293601157No Hit
ACATTTGGCCACAAGCTTTTGCTGACTCTTAATGAAATCTTTTTAATTAC67030.11400840665300199No Hit
ACATTTGGCCACAAGCTTATGCTGACACTTAATGAAATCTTTTTAATTAC60240.10245959147809697No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)