FastQCFastQC Report
Tue 13 Sep 2022
EGAF00000710444

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710444
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6010327
Sequences flagged as poor quality0
Sequence length101
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTGCGTGCAGATTCAAGCTTTTGAAATGGTTTCAGCTCTGTTCAATTG3198295.321324447072514No Hit
AAGTGCGTGCAGATTCAAGCTTATTGAAGTTTAGGGAAAGAAGGTTGCTG735051.222978383705246No Hit
AAGTGCGTGCAGATTCAAGCTTGCCAGAAATATATAAACACCTACCCCAG349070.580783707774968No Hit
AAGTGCGTGCAGATTCAAGCTTGGATGAACGTCCGTGGTTGGCAGTACTC315800.525428982482983No Hit
AAGTGCGTGCAGATTCAAGCTTCAGTGTGTCCAGAGTTTTTATTGGGGCT312780.5204042974700045No Hit
AAGTGCGTGCAGATTCAAGCTTTTCTGGAATATTATTTAAATTAAAATCT273110.4544012330776678No Hit
AAGTGCGTGCAGATTCAAGCTTCATGTCAATAAACGCATCTTGGTGTCTG269060.44766283099072646No Hit
AAGTGCGTGCAGATTCAAGCTTAGGGAACACTGTATGTGTAATTCCAATG268330.4464482548120926No Hit
AAGTGCGTGCAGATTCAAGCTTATCCACCATGTCAATAAACGCATCTTGG224480.37349049394483863No Hit
AAGTGCGTGCAGATTCAAGCTTCTACAGTTACCTTTATTTTGCATGTCAA210050.34948181687951424No Hit
AAGTGCGTGCAGATTCAAGCTTTGATCCTTGGTGATTGAGAGGATAGTGA181920.3026790389274993No Hit
AAGTGCGTGCAGATTCAAGCTTTCCATGTCAATAAACGCATCTTGGTGTC168460.280284250757072No Hit
AAGTGCGTGCAGATTCAAGCTTAGGACAAAGGATTGACAATTGGTTGCAG161490.26868754395559513No Hit
AAGTGCGTGCAGATTCAAGCTTTTAAAAAGAACTGTGAACAAATACATGT160160.26647468598630325No Hit
AAGTGCGTGCAGATTCAAGCTTGTGCCACCATGTCAATAAACGCATCTTG159370.26516028162860356No Hit
AAGTGCGTGCAGATTCAAGCTTAAATCTTATCACTCATTTGGCACATAGC151080.25136735488767914No Hit
AAGTGCGTGCAGATTCAAGCTTGAAAGCAAGGCCTGTACTCCACTTGAAA143350.23850615781803552No Hit
AAGTGCGTGCAGATTCAAGCTTCTAGTGCCTGATGCTCTATTATTAGTTT142100.23642640408749804No Hit
AAGTGCGTGCAGATTCAAGCTTTTTTTGCCTGTAATGTTTTATTTTAAAA140860.2343632883868049No Hit
AAGTGCGTGCAGATTCAAGCTTATTTTTGTTAACAAGCAGTCTGTGTGTG138480.2304034372838616No Hit
AAGTGCGTGCAGATTCAAGCTTTCCTTACCTAGGTTCACAGCCACTGACA135050.22469659304726683No Hit
AAGTGCGTGCAGATTCAAGCTTCTCTACTTTTACTTCAAGGCACTCTTAA131440.21869026427347463No Hit
AAGTGCGTGCAGATTCAAGCTTAGTCCTCCGTTATACTAGTGGGAACAAT124480.20711019550184206No Hit
AAGTGCGTGCAGATTCAAGCTTCACAGTCTGGGGAGGTGAAAGGGAAGCA119110.19817557347545314No Hit
AAGTGCGTGCAGATTCAAGCTTATTTTTTAGAAGACACAACATCAATAAA117440.1953970224914551No Hit
AAGTGCGTGCAGATTCAAGCTTGTTGGCGATTCTAACATGTCAATAAACG116760.19426563646204276No Hit
AAGTGCGTGCAGATTCAAGCTTATATAAATGTGAGGGGCACCAGTGCAGT115900.192834765895433No Hit
AAGTGCGTGCAGATTCAAGCTTAGGTGTCCAATTTGGGGCTGCCTGATTA114740.19090475443349422No Hit
AAGTGCGTGCAGATTCAAGCTTATGGAGGCCAGATATGGCAAAGTTGTGT113770.18929086553859714No Hit
AAGTGCGTGCAGATTCAAGCTTTTGATTTTTATTTATTTATTTCTCTGAA111690.18583015533098282No Hit
AAGTGCGTGCAGATTCAAGCTTTTTTTAATACGTACATCTATCCACATGT110770.18429945658530728No Hit
AAGTGCGTGCAGATTCAAGCTTGAGGGGTGAGGAAAAAAAACCTAGAGGG109940.18291850010823038No Hit
AAGTGCGTGCAGATTCAAGCTTCCTCTCCTTTCTTGGCCTTTGCCCACTT109080.18148762954162062No Hit
AAGTGCGTGCAGATTCAAGCTTTAGTGTTTCCAGAAGCAGCTTCAAGTTG107600.17902520112466427No Hit
AAGTGCGTGCAGATTCAAGCTTACAAGCAGAGAAGGAGCAGAGTGTCCGC107350.17860925037855677No Hit
AAGTGCGTGCAGATTCAAGCTTTTTAAAGTAAACTAAATACTTAAATTAT104860.17446638094732617No Hit
AAGTGCGTGCAGATTCAAGCTTGTATCATGTCAATAAACGCATCTTGGTG103980.1730022343210278No Hit
AAGTGCGTGCAGATTCAAGCTTCCACTGCGAAAGCCATCACCACACACGA103210.1717211060230167No Hit
AAGTGCGTGCAGATTCAAGCTTAAAAGGCCACTCTCTCTATAATATTTCA98230.16343536716055548No Hit
AAGTGCGTGCAGATTCAAGCTTCCACTGTGGGGGTAACATGTCAATAAAC97510.1622374290117659No Hit
AAGTGCGTGCAGATTCAAGCTTCCTCAGATCACTGAGATAGGAATGAAAA97230.16177156417612554No Hit
AAGTGCGTGCAGATTCAAGCTTCTTCTGTTCTCTTTAACTCATCTACGTG95890.15954206817698938No Hit
AAGTGCGTGCAGATTCAAGCTTCTAGAATAATTTATATGTGATAGAGGAT94480.15719610596894312No Hit
AAGTGCGTGCAGATTCAAGCTTCAGATTGTGAAGTTATCCTTAGACTAAG88180.14671414716703435No Hit
AAGTGCGTGCAGATTCAAGCTTGGGTACTCCTGGTCTAGTGCTCTTTCCT87720.14594879779419653No Hit
AAGTGCGTGCAGATTCAAGCTTCTGTAGTGATTGAAAGCATGTCAATAAA87210.14510025827213727No Hit
AAGTGCGTGCAGATTCAAGCTTCACCTATTTTAGAAAATTTTCATGTCAA86210.14343645528770732No Hit
AAGTGCGTGCAGATTCAAGCTTTAATATTTAATACTGCTATCTTTTAGTA84730.14097402687075097No Hit
AAGTGCGTGCAGATTCAAGCTTTCCTGGTGATTCTAACTTTGAGAACCAT83720.1392935858564767No Hit
AAGTGCGTGCAGATTCAAGCTTATTTTTCCCATTTTGAAAATGCATTTAT82120.13663150108138875No Hit
AAGTGCGTGCAGATTCAAGCTTTGATCCTTGGTGATTGAGAAGATAGTGA81550.13568313338026367No Hit
AAGTGCGTGCAGATTCAAGCTTTAGTTAGTAAAATGCTTTTCAGTAAAAT81330.13531709672368908No Hit
AAGTGCGTGCAGATTCAAGCTTTTAGAAAACATCTCCTAGTAATTCCTAA80240.13350355147066043No Hit
AAGTGCGTGCAGATTCAAGCTTTGCTCCAGAGATTAAATTACCAACAGGG78810.13112431320292556No Hit
AAGTGCGTGCAGATTCAAGCTTGCGAGAACCTCGCACAGGGTTGGTATTT78070.1298930989944474No Hit
AAGTGCGTGCAGATTCAAGCTTCCATTTCTTTCATTTTTACTAAGACAAC78060.1298764609646031No Hit
AAGTGCGTGCAGATTCAAGCTTCCCTTTTAGGGCAAAGCGTGGCGGATCA77760.1293773200692741No Hit
AAGTGCGTGCAGATTCAAGCTTAGCGTTCCAATAACGGAACACTAGGCAT77080.12824593403986173No Hit
AAGTGCGTGCAGATTCAAGCTTTATATCAGTGTCATGTCAATAAACGCAT76770.12773015511468844No Hit
AAGTGCGTGCAGATTCAAGCTTCATCCAATACCAAGTTTTAGCACAAGTC76250.12686497756278486No Hit
AAGTGCGTGCAGATTCAAGCTTTATAGATAAAAGAAGGGAAATGAACTCT74590.12410306460863112No Hit
AAGTGCGTGCAGATTCAAGCTTGGTCACAGCATATAACAAGTGTCTAAAC73010.12147425589323177No Hit
AAGTGCGTGCAGATTCAAGCTTTGCAAAGGGATTTCGAACTATAATAGGG72980.12142434180369888No Hit
AAGTGCGTGCAGATTCAAGCTTAACTAAATTAGGCTTATAGGAAAATGAT71120.11832966825265914No Hit
AAGTGCGTGCAGATTCAAGCTTCTTGGATACCCTCTACACCATCCCAAGT70860.11789707947670734No Hit
AAGTGCGTGCAGATTCAAGCTTCTATGTGGATCCCAGCTAGAGCTCATAC70470.11724819631277965No Hit
AAGTGCGTGCAGATTCAAGCTTGTGGGAGTAGGTGCTTTATCAGATCCCT70410.11714836813371385No Hit
AAGTGCGTGCAGATTCAAGCTTATCCACCAAGATCAAGTTGGCTTCATCC70090.11661595117869626No Hit
AAGTGCGTGCAGATTCAAGCTTGAGCATGTCAATAAACGCATCTTGGTGT70070.11658267511900768No Hit
AAGTGCGTGCAGATTCAAGCTTCCAGTCATGTCAATAAACGCATCTTGGT69650.11588387786554707No Hit
AAGTGCGTGCAGATTCAAGCTTTTGAAGGAGAGGACTGGGAATCTAGTTT68460.11390395231407541No Hit
AAGTGCGTGCAGATTCAAGCTTGCAAAATACTTATTAAATTAAAAAACAG67370.11209040706104675No Hit
AAGTGCGTGCAGATTCAAGCTTTTTGATCATGTCAATAAACGCATCTTGG67220.11184083661338227No Hit
AAGTGCGTGCAGATTCAAGCTTAATAAATTATTAAAGAGCTATGTTACTC66030.10986091106191061No Hit
AAGTGCGTGCAGATTCAAGCTTAACTAACCACTGTTCCTGCCGCCAGGTG64830.10786434748059465No Hit
AAGTGCGTGCAGATTCAAGCTTTCCTTTTATCACCTTTATTTTTTACCTT64560.10741512067479857No Hit
AAGTGCGTGCAGATTCAAGCTTAGGGTATAGGGACGCTAGTTCAGACTAA64500.10731529249573277No Hit
AAGTGCGTGCAGATTCAAGCTTCAACATGTCAATAAACGCATCTTGGTGT64220.10684942766009237No Hit
AAGTGCGTGCAGATTCAAGCTTTGTCAACAGGAATTACAATGTGATTCAC62950.10473639786986631No Hit
AAGTGCGTGCAGATTCAAGCTTCATAAGTGAAGGAGAAATAAAATACTTT62770.10443691333266891No Hit
AAGTGCGTGCAGATTCAAGCTTACCTGTATTCTCAGAGACTGCCTATATA62550.10407087667609434No Hit
AAGTGCGTGCAGATTCAAGCTTGGCCTATATGTTGAGTTTTATTCCTCCC62250.10357173578076533No Hit
AAGTGCGTGCAGATTCAAGCTTGGTCTTCGGAAGCTCGTATGCCGTCTTC61590.10247362581104157No Hit
AAGTGCGTGCAGATTCAAGCTTTGTCCCTAGTAAATGGCTCTGCCTCTGA61100.10165836234867089No Hit
AAGTGCGTGCAGATTCAAGCTTAGGCATGTCAATAAACGCATCTTGGTGT60960.10142542993085069No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)