FastQCFastQC Report
Mon 12 Sep 2022
EGAF00000710445

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710445
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5716282
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAATTAC381315166.70683846598192No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTA617121.0795828477321447No Hit
ACATTTGGCCACAAGCTTTCTGGAAAATTGATGAATATTTGAAAATTAAT330880.5788377830205017No Hit
ACATTTGGCCACAAGCTTATAGGTTGGAAGTGAGTGGTTTGACATAGTTA191990.335865165504431No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAGATCTTTTTAATTAC175780.3075075722296416No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCCTTTTAATTAC162220.2837858594100151No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGGAATCTTTTTAATTAC159400.2788525828501813No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAGTCTTTTTAATTAC156490.273761861293757No Hit
ACATTTGGCCACAAGCTTTTGCTGACGCTTAATGAAATCTTTTTAATTAC150980.26412272872472004No Hit
ACATTTGGCCACAAGCTTCCAATTAATATCCACTTTATGAATGTAATTTG148730.260186603809959No Hit
ACATTTGGCCACAAGCTTTTGCTGGCACTTAATGAAATCTTTTTAATTAC146640.25653038111135873No Hit
ACATTTGGCCACAAGCTTTTGCCGACACTTAATGAAATCTTTTTAATTAC144730.25318904840593937No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTCTTAATTAC134990.23615000099715167No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTCTTTAATTAC134450.235205331017609No Hit
ACATTTGGCCACAAGCTTCTGCTGACACTTAATGAAATCTTTTTAATTAC133590.23370085660574477No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAGTGAAATCTTTTTAATTAC130500.22829524505613963No Hit
ACATTTGGCCACAAGCTTTCGCTGACACTTAATGAAATCTTTTTAATTAC123810.21659183364291684No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAACCTTTTTAATTAC120220.21031152766780922No Hit
ACATTTGGCCACAAGCTTTTGCTGACACCTAATGAAATCTTTTTAATTAC118330.20700518273940996No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTCTAATTAC117670.20585058609774676No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAACGAAATCTTTTTAATTAC114710.20067239509877224No Hit
ACATTTGGCCACAAGCTTTGAACTACTATTGTGAAAAAAATGGTTATAAG113330.19825823848438548No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAGTTAC107990.1889165020200193No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAACTAC105700.18491040155121807No Hit
ACATTTGGCCACAAGCTTTGCTGACACTTAATGAAATCTTTTTAATTACT95980.16790634191945045No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTCAATGAAATCTTTTTAATTAC85250.14913539954816785No Hit
ACATTTGGCCACAAGCTTTTCCTGACACTTAATGAAATCTTTTTAATTAC80860.14145558249225632No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAATTGC79760.13953125475615094No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTGATTAC79390.13888398088127912No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTTAATCAC77490.1355601420643698No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTGATGAAATCTTTTTAATTAC77040.13477291708141761No Hit
ACATTTGGCCACAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAG70730.12373427343157668No Hit
ACATTTGGCCACAAGCTTAATGATAATCTAAAGGATGATCTGGTCCTTAC70380.12312198733372497No Hit
ACATTTGGCCACAAGCTTTTGCTGACACTTAATGAAATCTTTTCAATTAC69500.12158252514484066No Hit
ACATTTGGCCACAAGCTTCTAGAAATAATAAGTGAGTTTAGCAAGTTAAC68410.11967569129724531No Hit
ACATTTGGCCACAAGCTTTTGCTGACTCTTAATGAAATCTTTTTAATTAC60350.1055756171581458No Hit
ACATTTGGCCACAAGCTTTTTGATGTGCTGCTGGATTCAGTTTGCCAGTA57400.10041492004768135No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)