FastQCFastQC Report
Mon 5 Sep 2022
EGAF00000710448

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710448
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5090615
Sequences flagged as poor quality0
Sequence length101
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTGCGTGCAGATTCAAGCTTTTGAAATGGTTTCAGCTCTGTTCAATTG1217732.392107829800525No Hit
AAGTGCGTGCAGATTCAAGCTTATTGAAGTTTAGGGAAAGAAGGTTGCTG717191.4088474575272338No Hit
AAGTGCGTGCAGATTCAAGCTTCAGTGTGTCCAGAGTTTTTATTGGGGCT507830.9975808423933061No Hit
AAGTGCGTGCAGATTCAAGCTTTGATCCTTGGTGATTGAGAGGATAGTGA301710.5926788806460516No Hit
AAGTGCGTGCAGATTCAAGCTTGCCAGAAATATATAAACACCTACCCCAG254300.4995467148861189No Hit
AAGTGCGTGCAGATTCAAGCTTTTCTGGAATATTATTTAAATTAAAATCT246890.4849905168628938No Hit
AAGTGCGTGCAGATTCAAGCTTGGATGAACGTCCGTGGTTGGCAGTACTC198660.39024754376435855No Hit
AAGTGCGTGCAGATTCAAGCTTAGGGAACACTGTATGTGTAATTCCAATG174560.34290552320299217No Hit
AAGTGCGTGCAGATTCAAGCTTAGGACAAAGGATTGACAATTGGTTGCAG169270.33251385146981255No Hit
AAGTGCGTGCAGATTCAAGCTTATTTTTGTTAACAAGCAGTCTGTGTGTG154510.30351931937496746No Hit
AAGTGCGTGCAGATTCAAGCTTAGGTGTCCAATTTGGGGCTGCCTGATTA146360.28750946594861326No Hit
AAGTGCGTGCAGATTCAAGCTTCATAAGTGAAGGAGAAATAAAATACTTT140450.27589986671551475No Hit
AAGTGCGTGCAGATTCAAGCTTCATCCAATACCAAGTTTTAGCACAAGTC139090.27322828381246667No Hit
AAGTGCGTGCAGATTCAAGCTTCACAGTCTGGGGAGGTGAAAGGGAAGCA132970.2612061607487504No Hit
AAGTGCGTGCAGATTCAAGCTTCTCTACTTTTACTTCAAGGCACTCTTAA129740.2548611513540112No Hit
AAGTGCGTGCAGATTCAAGCTTGAGGGGTGAGGAAAAAAAACCTAGAGGG126540.24857507393507466No Hit
AAGTGCGTGCAGATTCAAGCTTAAATCTTATCACTCATTTGGCACATAGC125250.24604099897556583No Hit
AAGTGCGTGCAGATTCAAGCTTGCGAGAACCTCGCACAGGGTTGGTATTT120400.23651366288749004No Hit
AAGTGCGTGCAGATTCAAGCTTAATAAATTATTAAAGAGCTATGTTACTC109540.2151802876469739No Hit
AAGTGCGTGCAGATTCAAGCTTCTAGTGCCTGATGCTCTATTATTAGTTT96180.18893591442291352No Hit
AAGTGCGTGCAGATTCAAGCTTTGTTATTGATTCCAAGTTTAATTCTGTT93030.18274805696364782No Hit
AAGTGCGTGCAGATTCAAGCTTATCCACCATGTCAATAAACGCATCTTGG90140.17707094329467069No Hit
AAGTGCGTGCAGATTCAAGCTTCCACTGCGAAAGCCATCACCACACACGA90060.17691379135919727No Hit
AAGTGCGTGCAGATTCAAGCTTCCTCTCCTTTCTTGGCCTTTGCCCACTT85420.1677989791017392No Hit
AAGTGCGTGCAGATTCAAGCTTGCAAAATACTTATTAAATTAAAAAACAG85100.16717037135984553No Hit
AAGTGCGTGCAGATTCAAGCTTATATAAATGTGAGGGGCACCAGTGCAGT79690.1565429717234558No Hit
AAGTGCGTGCAGATTCAAGCTTACAAGCAGAGAAGGAGCAGAGTGTCCGC79320.15581614402189128No Hit
AAGTGCGTGCAGATTCAAGCTTCTTCTGTTCTCTTTAACTCATCTACGTG78430.1540678287397495No Hit
AAGTGCGTGCAGATTCAAGCTTGCTCCCAAGGGACTGAAATCCTAGCACT77080.15141588982863563No Hit
AAGTGCGTGCAGATTCAAGCTTATGGAGGCCAGATATGGCAAAGTTGTGT76320.1499229464416382No Hit
AAGTGCGTGCAGATTCAAGCTTTTTAAAGTAAACTAAATACTTAAATTAT76230.1497461505142306No Hit
AAGTGCGTGCAGATTCAAGCTTCCTCAGATCACTGAGATAGGAATGAAAA74180.14571913216772434No Hit
AAGTGCGTGCAGATTCAAGCTTTAATATTTAATACTGCTATCTTTTAGTA73590.1445601366436079No Hit
AAGTGCGTGCAGATTCAAGCTTCCCTTTTAGGGCAAAGCGTGGCGGATCA73570.14452084865973952No Hit
AAGTGCGTGCAGATTCAAGCTTAGTCCTCCGTTATACTAGTGGGAACAAT71850.1411420820470611No Hit
AAGTGCGTGCAGATTCAAGCTTAACTAAATTAGGCTTATAGGAAAATGAT70950.1393741227729852No Hit
AAGTGCGTGCAGATTCAAGCTTTTCTTCTAAATTAGGCTATTCGAAAAAA66270.1301807345477904No Hit
AAGTGCGTGCAGATTCAAGCTTATCCACCAAGATCAAGTTGGCTTCATCC66210.13006287059618532No Hit
AAGTGCGTGCAGATTCAAGCTTAGGGTATAGGGACGCTAGTTCAGACTAA64290.12629122414482338No Hit
AAGTGCGTGCAGATTCAAGCTTGAAAGCAAGGCCTGTACTCCACTTGAAA63840.1254072445077854No Hit
AAGTGCGTGCAGATTCAAGCTTTCCTTACCTAGGTTCACAGCCACTGACA63660.12505365265297022No Hit
AAGTGCGTGCAGATTCAAGCTTTTTTTGCCTGTAATGTTTTATTTTAAAA63630.1249947206771677No Hit
AAGTGCGTGCAGATTCAAGCTTGAAGTTGGTGAGCAGAAATACAATTTAA62360.12249993370152723No Hit
AAGTGCGTGCAGATTCAAGCTTTGAGAGTTGTTGGAAGAGAGCCTAGTGG60520.11888543918563868No Hit
AAGTGCGTGCAGATTCAAGCTTTACAGAACCATCTCCACCCCCACTCCTA60160.11817825547600831No Hit
AAGTGCGTGCAGATTCAAGCTTGTGCCACCATGTCAATAAACGCATCTTG59590.11705854793576023No Hit
AAGTGCGTGCAGATTCAAGCTTCTTGGATACCCTCTACACCATCCCAAGT58800.11550667257296024No Hit
AAGTGCGTGCAGATTCAAGCTTGGTCTTCGGAAGCTCGTATGCCGTCTTC57890.11371906930695015No Hit
AAGTGCGTGCAGATTCAAGCTTTCAGGGCTTCCACAAACAATTTTGTTTT57740.11342440942793748No Hit
AAGTGCGTGCAGATTCAAGCTTCATGTCAATAAACGCATCTTGGTGTCTG57510.11297259761345142No Hit
AAGTGCGTGCAGATTCAAGCTTGGTCAATATGGTATGATAGGATCCCATT57450.11285473366184635No Hit
AAGTGCGTGCAGATTCAAGCTTGGTCACAGCATATAACAAGTGTCTAAAC57330.11261900575863623No Hit
AAGTGCGTGCAGATTCAAGCTTGGCCTATATGTTGAGTTTTATTCCTCCC56860.11169573813772991No Hit
AAGTGCGTGCAGATTCAAGCTTTCCATTAGTTTTAATAGGGGATTTTGTA56500.11098855442809956No Hit
AAGTGCGTGCAGATTCAAGCTTAACAGTTTGCAGAGTGTGCACGTTTTAA55640.10929917112176034No Hit
AAGTGCGTGCAGATTCAAGCTTCAATGTCTCCATTCCTTCACTGCTAAAA55450.10892593527501097No Hit
AAGTGCGTGCAGATTCAAGCTTCTAGAATAATTTATATGTGATAGAGGAT54580.10721690797673758No Hit
AAGTGCGTGCAGATTCAAGCTTCTACAGTTACCTTTATTTTGCATGTCAA53810.10570432059780596No Hit
AAGTGCGTGCAGATTCAAGCTTCCATTTCTTTCATTTTTACTAAGACAAC53760.10560610063813508No Hit
AAGTGCGTGCAGATTCAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTT53600.10529179676718825No Hit
AAGTGCGTGCAGATTCAAGCTTAATGATAATCTAAAGGATGATCTGGTCC52890.1038970733398617No Hit
AAGTGCGTGCAGATTCAAGCTTTCAGAAGCCTCTAATGAAACATATTTCT52190.10252199390446931No Hit
AAGTGCGTGCAGATTCAAGCTTCTATGTGGATCCCAGCTAGAGCTCATAC51660.10148086233195792No Hit
AAGTGCGTGCAGATTCAAGCTTTATAGATAAAAGAAGGGAAATGAACTCT51340.10085225459006426No Hit
AAGTGCGTGCAGATTCAAGCTTAGTTACGGTTTGGAAATGTTTGTCAAAT51210.10059688269491998No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)