FastQCFastQC Report
Sun 11 Sep 2022
EGAF00000710449

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710449
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2359176
Sequences flagged as poor quality0
Sequence length101
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGCATTAGATGAAGCTTAGAAGGGCATTTTCTAACCATTACAAATTG234120.9923803904414084No Hit
CAATGCATTAGATGAAGCTTTTGTTATAAGGTCTCATCACACCATATGCC210250.8912009956018543No Hit
CAATGCATTAGATGAAGCTTGTGACTTAGCCTGGGTGAGTCAGGGGTGAT195220.8274923108746444No Hit
CAATGCATTAGATGAAGCTTCTTTTCCTGCTCTTATTGCATGATTCCACT162260.6877825138946819No Hit
CAATGCATTAGATGAAGCTTCTTTTAAATATAGTAAGGAAGAGTTTCTCT85600.3628385504091259No Hit
CAATGCATTAGATGAAGCTTATTCCCTTTTCGGGACCTCTGTTCTGTTTA84710.35906604678921794No Hit
CAATGCATTAGATGAAGCTTCACCAGGCAGGGTAACTCTCTTGTTAGGGG81890.3471127207126556No Hit
CAATGCATTAGATGAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAG74570.31608493813094063No Hit
CAATGCATTAGATGAAGCTTGGACAAGAGCCCCCAACTCTGATCTCAATT74460.3156186736385925No Hit
CAATGCATTAGATGAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTAC71720.3040044490110106No Hit
CAATGCATTAGATGAAGCTTAAGGGGCATAGCTGGACCCCTGCATATATG67380.28560819540381893No Hit
CAATGCATTAGATGAAGCTTATTGAACTCTTACAACACCATATCTTTATT63050.26725432947774985No Hit
CAATGCATTAGATGAAGCTTACAGCCAGAAGAAGAGATGAGAATGTGCAA61170.2592854454267083No Hit
CAATGCATTAGATGAAGCTTCTGAATAGGTGGGAATGAGTTGCATTGTAT59610.2526729671715887No Hit
CAATGCATTAGATGAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTAC59390.25174043818689235No Hit
CAATGCATTAGATGAAGCTTCCCAAAGTGATGGCACCTCAAGGGTCAGGA57390.24326290196238007No Hit
CAATGCATTAGATGAAGCTTCTTTACCTACAAAAAGAAATCAAGATATTC56530.2396175613858398No Hit
CAATGCATTAGATGAAGCTTTTGATAAATATTAGCTATGGTCATTATCCT54640.2316062896536757No Hit
CAATGCATTAGATGAAGCTTACTGGGATAGCCCAATCTGACTTTTCTTTT54100.22931735487305738No Hit
CAATGCATTAGATGAAGCTTTGACTTTCACCCTCACCAAGATGTAAGGAG49770.21096348894698827No Hit
CAATGCATTAGATGAAGCTTCCAAGGCCCTCCTGGAGGGCCAGGAATCGG49180.20846261576075714No Hit
CAATGCATTAGATGAAGCTTTTATCTAGAGAAATCCCAATTATGCAGGAT48670.2063008440235065No Hit
CAATGCATTAGATGAAGCTTTATTGAAGTATAATTGATATACAAAGACCT48660.20625845634238393No Hit
CAATGCATTAGATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGA47960.20329131866380465No Hit
CAATGCATTAGATGAAGCTTCCTTTCTCGATGTGAAAAGAACAAACCTAT45550.19307588751326735No Hit
CAATGCATTAGATGAAGCTTGTAGGGCTGCATGGACCAATATGGTAACCA44660.18930338389335938No Hit
CAATGCATTAGATGAAGCTTTTGTTTCCTTTTGGGACTATATCAGAACTA42880.18175837665354344No Hit
CAATGCATTAGATGAAGCTTGGTACAAGGAATGAGCCCACTTTCCCAGCA42560.18040197085762147No Hit
CAATGCATTAGATGAAGCTTTCAGCTACTAACTGTGTGATCTAAGGGAAG41660.17658707955659095No Hit
CAATGCATTAGATGAAGCTTTTCAGATTAAAGGAACAACGTCAAGAAAAG39670.16815193101320122No Hit
CAATGCATTAGATGAAGCTTTCCACTGGTAGCCACAGCTGGTACAAGGAA39640.16802476796983354No Hit
CAATGCATTAGATGAAGCTTGTACAAGGAATGAGCCCACTTTCCCAGCAG39530.16755850347748535No Hit
CAATGCATTAGATGAAGCTTCAAGAGGGAAGATGACTTCTCAAACACCCA38780.16437942739329325No Hit
CAATGCATTAGATGAAGCTTAAAGTATTTAATTTATCCAAACCACATGGG38510.1632349600029841No Hit
CAATGCATTAGATGAAGCTTTAGACCCAGGCAACTCTAAATATGACGCAC38410.1628110831917585No Hit
CAATGCATTAGATGAAGCTTCCACACATGGAGTTTCTCTCTCTCCTTTCT38100.16149706507695907No Hit
CAATGCATTAGATGAAGCTTAATTTTTGCTGTCACACTAGATTATTGGAA38050.16128512667134628No Hit
CAATGCATTAGATGAAGCTTAAAGCCTCTTTTTTGTTCTTTTGTTCCTCT37530.15908096725297308No Hit
CAATGCATTAGATGAAGCTTGTTGGTGTTTGATAAGGGCTAAGACATGAA37050.15704635855909013No Hit
CAATGCATTAGATGAAGCTTTTCCAATTCTACTTTTCTGATTCAGTGCTT36950.1566224817478645No Hit
CAATGCATTAGATGAAGCTTCAGTCGTCTCTCCACAAAACCAGGTTATAT36460.154545485372859No Hit
CAATGCATTAGATGAAGCTTGTAATCATTTGGACGACGCCTTCATTTCCC36400.15429115928612364No Hit
CAATGCATTAGATGAAGCTTATTGTATAATAAAGTGTTGAATGTCTTATG35770.15162073537540224No Hit
CAATGCATTAGATGAAGCTTTGATGACTACACCCAGATATTATAAGTAGG34220.14505064480140523No Hit
CAATGCATTAGATGAAGCTTGAATCTGCACTGACTTCCAGTTTGTGCCTT34040.14428766654119915No Hit
CAATGCATTAGATGAAGCTTTGGCTCCGTGCACACTTTTCCTTCCCCATA33950.14390617741109607No Hit
CAATGCATTAGATGAAGCTTCATCCATGTCCCTGCAAAGGACAATGAACT33640.14259215929629668No Hit
CAATGCATTAGATGAAGCTTTTTGATGTGCTGCTGGATTTGGTTTGCCAG33330.14127814118149726No Hit
CAATGCATTAGATGAAGCTTTGCCTAAGACAGACACACGCATGCACACAC33050.14009128611006555No Hit
CAATGCATTAGATGAAGCTTAATTTACTTCAACAATTATTCAGTGGATTA32590.13814145277842774No Hit
CAATGCATTAGATGAAGCTTCCTAATTTTTAAACTGCAACCCTTCATCCT31930.13534386582433866No Hit
CAATGCATTAGATGAAGCTTGAATAAGTTATCTCCTGGGGTGCCTGTTTT31260.13250389118912706No Hit
CAATGCATTAGATGAAGCTTCCTGTACAAGGAATGAGCCCACTTTCCCAG31240.13241911582688193No Hit
CAATGCATTAGATGAAGCTTACTTTAACCCTTAAAGAATGAGCTTTAAAA31090.1317833006100435No Hit
CAATGCATTAGATGAAGCTTAGATTCAAAGGTGAAATGATTCATCTCCAT31060.13165613756667582No Hit
CAATGCATTAGATGAAGCTTGTTTGGCCGTTTTAGGGTTTGTTGGAATTT30850.13076599626310204No Hit
CAATGCATTAGATGAAGCTTCTTTTCCTTCATTTCATTTGTTGCCTCCTC28920.12258517380644768No Hit
CAATGCATTAGATGAAGCTTCATCTAATCAAGATGCCATAATGTCCTCTC28850.12228846003858974No Hit
CAATGCATTAGATGAAGCTTGAGGAGCTCCTCCCCAATGTTTTGATGTTG28180.11944848540337812No Hit
CAATGCATTAGATGAAGCTTTGAGCATCTGTAGTTTAAAAAACTTTCCAG27150.11508255424775429No Hit
CAATGCATTAGATGAAGCTTGAAGCATTCCGGCCCCACCACTCTGTGCCC26830.11372614845183233No Hit
CAATGCATTAGATGAAGCTTCTGATTTGTACAAGGAATGAGCCCACTTTC26780.11351421004621952No Hit
CAATGCATTAGATGAAGCTTCAACCAACATCTGACCACAATCCAGTGAGA26280.11139482599009146No Hit
CAATGCATTAGATGAAGCTTTACAATCTTTTAAATGCTCTTCACTTAGAA26220.11114049990335609No Hit
CAATGCATTAGATGAAGCTTCCTGGATGAGGCACCTAGTGGCGTCCCCTA26190.1110133368599884No Hit
CAATGCATTAGATGAAGCTTTTGTTTGGTGCCAGGAACCAGGTGGAGCCC26090.11058946004876277No Hit
CAATGCATTAGATGAAGCTTTGGGTGGGCAACATTATCTGTCTGGAATTT25600.10851246367375729No Hit
CAATGCATTAGATGAAGCTTTGATGGCTGTAGGTCATGGATTTCTCATTT25260.10707128251559019No Hit
CAATGCATTAGATGAAGCTTGGTATGGAGGAGGAACAGAAAAAATGCCAG24540.10401936947476577No Hit
CAATGCATTAGATGAAGCTTAGGGATGGTCTTCTCTAGAGCTTCCAAACT24450.1036378803446627No Hit
CAATGCATTAGATGAAGCTTATTGTACAAGGAATGAGCCCACTTTCCCAG24150.10236624991098588No Hit
CAATGCATTAGATGAAGCTTGGCTCTGTCATTTACTGGCCTCAAAATGTC23980.10164565933190232No Hit
CAATGCATTAGATGAAGCTTTAAAATGCATCTGTCACAGGCTAATAAAAG23950.10151849628853464No Hit
CAATGCATTAGATGAAGCTTCAAGCAGGCTGTAATACCAGTTTCGTATGC23920.10139133324516694No Hit
CAATGCATTAGATGAAGCTTAATTCTGTTAGAGAACTTTAAGGACGATAT23840.10105223179618646No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)