FastQCFastQC Report
Sun 11 Sep 2022
EGAF00000710454

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000710454
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3242289
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGAGTGTCCCAAAGTTA93108028.71674918552911No Hit
TTGTCAGGGAGTTAAGCTTCAGAACACCTTGGAATACAGTTTAGCTTCCT1194843.6851742703997084No Hit
TTGTCAGGGAGTTAAGCTTGATTAGGTTAGGTATTTTTAAAGAAAACTCA409791.2638910350064414No Hit
TTGTCAGGGAGTTAAGCTTTCTTAGCACAGAAGGAGTAAACTGCAAATGA351591.084388220790929No Hit
TTGTCAGGGAGTTAAGCTTGAGCTCCACCGAAACCAGCACGGAATTTCTA317710.9798941426874656No Hit
TTGTCAGGGAGTTAAGCTTGTTTTCAGCCAGTGTAAGCGTGGTGTTCTTG317560.9794315065683534No Hit
TTGTCAGGGAGTTAAGCTTTCCTAGGGTGCTACACAGATATATAAAGCTG243750.7517836935572368No Hit
TTGTCAGGGAGTTAAGCTTGCAAAAGGAGATCATAAGACAATTATTGGAT174810.5391561332132947No Hit
TTGTCAGGGAGTTAAGCTTATTTTAAAAAACGGATTATTGAAACCCAGAA160790.49591507728027945No Hit
TTGTCAGGGAGTTAAGCTTGTAAAGAATTTTGTGAGCTGAAGTATTTTAA152700.47096356925616434No Hit
TTGTCAGGGAGTTAAGCTTTGTGGAAAATGGTCTTTCAGCAGCAGCATCT144720.4463513277193983No Hit
TTGTCAGGGAGTTAAGCTTTGGAGGACAAGATGTGCTGATCATTATCTTA126740.3908966782418224No Hit
TTGTCAGGGAGTTAAGCTTTTATCACAATGAAAGAAATACTCAAAGCATG126000.3886143400542024No Hit
TTGTCAGGGAGTTAAGCTTTATGATATTGGGCAAGTGAATAACTTCTAGC120440.37146596123911224No Hit
TTGTCAGGGAGTTAAGCTTTACCTTTAAAGAGTCCGATGAACTAAAGGCA117510.362429135712455No Hit
TTGTCAGGGAGTTAAGCTTGTCTATGAACTGAAGGAAGAAAGATGGGACC109740.33846458474244584No Hit
TTGTCAGGGAGTTAAGCTTTGAACCTAAGTTGAACCTTCCAACCCCGGCA102620.31650479028858935No Hit
TTGTCAGGGAGTTAAGCTTATACATAGTAGAGCAAGGAATTGAACCTAAA93960.2897952650118481No Hit
TTGTCAGGGAGTTAAGCTTAAGGATATAGCCATCCACTGTTAATTAACCT83420.2572873670422347No Hit
TTGTCAGGGAGTTAAGCTTCTCCACAGTGAAGGAAACAATAAACAGACTA81210.25047119488731573No Hit
TTGTCAGGGAGTTAAGCTTTATCCAAGCCTGAGGTTTAATCTTAACTACA77410.238751079869808No Hit
TTGTCAGGGAGTTAAGCTTGGATTATCCAGGAGGGAAACCTGACAATATA71130.21938204768297953No Hit
TTGTCAGGGAGTTAAGCTTGGGCCTGTGATGTTCATCTCAGCCCCATGTC68050.2098825860372101No Hit
TTGTCAGGGAGTTAAGCTTTAGTTGGCAAGGCAGTAGCAATTCTGGGTGC67820.2091732106545715No Hit
TTGTCAGGGAGTTAAGCTTCACTCATTTTTTCAACCAGTTGGCTGCAATT67760.20898815620692665No Hit
TTGTCAGGGAGTTAAGCTTAATCAGGCAGGACATTAGAGTCCAGGGGGGC63140.19473896373827257No Hit
TTGTCAGGGAGTTAAGCTTCCAACTAATGAGAATGAATCTCATCAATGTC63100.19461559410650933No Hit
TTGTCAGGGAGTTAAGCTTATCCACCAGGATCAAGTGGGCTTCATCCCTG62450.1926108375903567No Hit
TTGTCAGGGAGTTAAGCTTTAGAAAACTCTTTTTTCTTATCAGAATCTAG60010.1850852900527991No Hit
TTGTCAGGGAGTTAAGCTTCTTGCAGCACCTTTTTTTCACTGTCGCATCA59960.18493107801309508No Hit
TTGTCAGGGAGTTAAGCTTCAGGCATCACGATATTCCCATATGTCTACTG58580.18067482571726332No Hit
TTGTCAGGGAGTTAAGCTTCTGGAACCTAACCCTGCTGTAAGCCTCACCC57810.178299960305821No Hit
TTGTCAGGGAGTTAAGCTTTGAGGTCTGCACATCAGATAGCATTACTCCC56270.17355022948293627No Hit
TTGTCAGGGAGTTAAGCTTAATGCAGAAAATATACCCAAGTCAGGAGGTA55570.1713912609270796No Hit
TTGTCAGGGAGTTAAGCTTTCACTTGGGGATGTGGGCTTTGGTCGAAACT54560.16827617772505782No Hit
TTGTCAGGGAGTTAAGCTTCATAAAAGTATAAGCAATTCCAGATTCAAAA54410.16781354160594567No Hit
TTGTCAGGGAGTTAAGCTTATGAATACCCCAGTTGAAAAACAAATGGCTT54260.1673509054868335No Hit
TTGTCAGGGAGTTAAGCTTTGGAGTCATATCTGGGCCTGTATCTGTCTCT54150.16701163899948462No Hit
TTGTCAGGGAGTTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACA54100.1668574269597806No Hit
TTGTCAGGGAGTTAAGCTTTGTTGGGAGGATGCAGTGAGGTGATATATGG53570.16522277933891766No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGGGAGTGTCCCAAAGTTA53260.16426666469275256No Hit
TTGTCAGGGAGTTAAGCTTCCTCTTGGGAGAATTAGGGAAGTTTCAAGGC52060.1605655757398554No Hit
TTGTCAGGGAGTTAAGCTTTGATTTTTGCAGCTCCCCTGAAGATTTGGAA51860.1599487275810392No Hit
TTGTCAGGGAGTTAAGCTTGTATTGTTTCTTGGACCCATCCCCTACACTC50480.15569247528520747No Hit
TTGTCAGGGAGTTAAGCTTAATTTTTCCAACAGCCCTGCTCATAAAAGGA49460.15254654967524486No Hit
TTGTCAGGGAGTTAAGCTTTTTTATTTAAAAAAACCCAATAACTCAGTTT49420.15242318004348163No Hit
TTGTCAGGGAGTTAAGCTTATTTTGAGGGTAGCAACATGTCATATGTAAG48970.1510352716861452No Hit
TTGTCAGGGAGTTAAGCTTATCCCTTTTCCCTGAAAAACCTCTGTTGTAC48290.14893798794617014No Hit
TTGTCAGGGAGTTAAGCTTACCTCATTTTGGTTTTGTCAATAAAGGGTCA48230.14875293349852525No Hit
TTGTCAGGGAGTTAAGCTTTTCTGCCAGACTACTCAGAAGTAAAGTGATT48210.14869124868264366No Hit
TTGTCAGGGAGTTAAGCTTTAATCAGTAATCTTCAAGTAGGAAGTTATTC47480.14643975290296454No Hit
TTGTCAGGGAGTTAAGCTTCTGCACTTTCAACAAAACTGTAACCAGGGGC46750.14418825712328542No Hit
TTGTCAGGGAGTTAAGCTTCTTTTAAGAAATCAGACTGTTTATACCCCAA46400.14310877284535709No Hit
TTGTCAGGGAGTTAAGCTTGATTATGGGTGATGCTAGGCCCAATTTTCAC45720.14101148910538203No Hit
TTGTCAGGGAGTTAAGCTTTTTTTATTTAAAAAAACCCAATAACTCAGTT44270.13653933995396464No Hit
TTGTCAGGGAGTTAAGCTTTATACCAGACGAAGTAAATAGAAAAGAAGAA43850.13524395882045062No Hit
TTGTCAGGGAGTTAAGCTTCTGAAAGATCAAAAGAGGTCAGATGTACAGA42470.13098770652461889No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGGGTGTCCCAAAGTTA41290.12734830238760333No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGCGAGTGTCCCAAAGTTA41160.1269473510843728No Hit
TTGTCAGGGAGTTAAGCTTCTGAAACACCTTATTTCAGCTTATCTTCAAT40990.12642303014937903No Hit
TTGTCAGGGAGTTAAGCTTGATGCAGTGGTTCACACCTGTAATCCCATCA40350.12444911604116721No Hit
TTGTCAGGGAGTTAAGCTTTTAACATAGGGAGCCCCTTATTCACCATAAG40320.12435658881734478No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGAGTGTCCCAAGGTTA40290.12426406159352235No Hit
TTGTCAGGGAGTTAAGCTTAACAGGACACATAGGAAAAGTCCATAATTTG40170.12389395269823264No Hit
TTGTCAGGGAGTTAAGCTTTTTCCTTCGCAAGTACTGCTACATCTACATC39620.12219762026148812No Hit
TTGTCAGGGAGTTAAGCTTCAATTATAAAATGAATGACAGATGCACAAGA39260.12108729357561895No Hit
TTGTCAGGGAGTTAAGCTTGCTATGATCTCTAGAGAGCATATTTGCTATG39000.1202853909691579No Hit
TTGTCAGGGAGTTAAGCTTTTTAGCTGAAGGAGGCTTTGAGCCAAATTTA37660.11615250830508939No Hit
TTGTCAGGGAGTTAAGCTTTCTTTGCCTTCCTCTCATTGAGCATTTGATT37590.11593661144950373No Hit
TTGTCAGGGAGTTAAGCTTACTAAATTTTTCAGTTAATGACGGTGGCATT37580.11590576904156293No Hit
TTGTCAGGGAGTTAAGCTTCTATTTTCGCTATTTGAATGAGTGATGTTGG37190.11470291513187134No Hit
TTGTCAGGGAGTTAAGCTTTACAGTGGCTCCATTTCACTCAGGCTCACCA36280.11189625600925765No Hit
TTGTCAGGGAGTTAAGCTTAGAGGACATTGTGGAGATGTTAACTGGCCTA35580.10973728745340097No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTCTTCTAGGTGAGTGTCCCAAAGTTA34790.10730073722607701No Hit
TTGTCAGGGAGTTAAGCTTCCCGTTTTTCTAGGTGAGTGCCCCAAAGTTA34670.1069306283307873No Hit
TTGTCAGGGAGTTAAGCTTCTCTGTTCCCTGATGCAGTGTGGATATTTTT34610.10674557388314243No Hit
TTGTCAGGGAGTTAAGCTTCACAGCTGCTGATGGACACAGACACTGGGAC33820.10430902365581847No Hit
TTGTCAGGGAGTTAAGCTTTTTAGCTTGATGTAGTCTCATTTGTCTATTT33580.10356880586523903No Hit
TTGTCAGGGAGTTAAGCTTCTGACTTAAGTGCCCTGAAAAGGCTTTATGG33110.10211921269202098No Hit
TTGTCAGGGAGTTAAGCTTCCAAATCAGGTGACTTTCAGTTAATAAAAGA33100.10208837028408016No Hit
TTGTCAGGGAGTTAAGCTTTTTCTGTAAAAGGCCCGAGGGAAAATAAGTG32650.10070046192674374No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)