FastQCFastQC Report
Sat 11 May 2024
EGAF00000718624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000718624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30019624
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATA555370.18500231715094098No Hit
GTGAAAGATGAGCTGGAGGACCGCAATAGGGGTAGGTCCCCTGTGGAAAA510810.17015869352660778No Hit
CAAAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAGCCG486460.1620473327713898No Hit
CCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCC381210.1269869336138254No Hit
CTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGATTT379530.12642729968903008No Hit
CTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCT375440.1250648575744986No Hit
GGAAGATGAAGACAGATGGTGCAGCCACAGTTCGTTTCATCTCCAGTCGT360940.12023468381882464No Hit
CTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACGGACTTCACT342950.11424193720747469No Hit
GCAAAATCTTCAGGCTCTAGGCTGCTGATGGTGAGAGTGAAGTCCGTCCC311900.1038987030617039No Hit

[OK]Adapter Content

Adapter graph