FastQCFastQC Report
Thu 9 May 2024
EGAF00000718628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000718628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46176644
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGAGAACCACAGGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCA757930.16413709060363935No Hit
CGAGAACCACAGGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAA502130.10874112029449347No Hit

[OK]Adapter Content

Adapter graph